Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 SPTLC1P1-201ENST00000447199 261 ntBASIC20.74■□□□□ 0.91
CCDC93Q567U6 KRT17P7-201ENST00000451704 1104 ntBASIC20.74■□□□□ 0.91
CCDC93Q567U6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 SPDYE12P-201ENST00000618416 771 ntBASIC20.74■□□□□ 0.91
CCDC93Q567U6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC93Q567U6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC93Q567U6 AC016027.1-202ENST00000607927 1699 ntBASIC20.73■□□□□ 0.91
CCDC93Q567U6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC93Q567U6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 CU639417.3-201ENST00000624240 1404 ntBASIC20.73■□□□□ 0.91
CCDC93Q567U6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC93Q567U6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC93Q567U6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC93Q567U6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC93Q567U6 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.73■□□□□ 0.91
CCDC93Q567U6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC93Q567U6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC93Q567U6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.72■□□□□ 0.91
CCDC93Q567U6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC93Q567U6 ATP5G2P4-201ENST00000442175 420 ntBASIC20.72■□□□□ 0.91
CCDC93Q567U6 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.72■□□□□ 0.91
CCDC93Q567U6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 AC018529.1-201ENST00000613063 361 ntBASIC20.72■□□□□ 0.91
CCDC93Q567U6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.72■□□□□ 0.91
CCDC93Q567U6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC93Q567U6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC93Q567U6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC93Q567U6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC93Q567U6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC93Q567U6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC93Q567U6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms