Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX4Q33E94 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX4Q33E94 AC117947.1-201ENST00000427448 529 ntBASIC15.86■□□□□ 0.13
RFX4Q33E94 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.86■□□□□ 0.13
RFX4Q33E94 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
RFX4Q33E94 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.86■□□□□ 0.13
RFX4Q33E94 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.86■□□□□ 0.13
RFX4Q33E94 AC012306.2-201ENST00000609350 630 ntBASIC15.86■□□□□ 0.13
RFX4Q33E94 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
RFX4Q33E94 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX4Q33E94 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFX4Q33E94 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
RFX4Q33E94 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RFX4Q33E94 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX4Q33E94 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX4Q33E94 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX4Q33E94 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 AC073508.3-201ENST00000619697 1419 ntBASIC15.85■□□□□ 0.13
RFX4Q33E94 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX4Q33E94 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFX4Q33E94 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX4Q33E94 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
RFX4Q33E94 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX4Q33E94 TSPY5P-201ENST00000426936 936 ntBASIC15.85■□□□□ 0.13
RFX4Q33E94 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX4Q33E94 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX4Q33E94 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX4Q33E94 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX4Q33E94 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
RFX4Q33E94 AC133561.5-201ENST00000635547 218 ntBASIC15.85■□□□□ 0.13
RFX4Q33E94 AC097493.4-201ENST00000641197 219 ntBASIC15.85■□□□□ 0.13
RFX4Q33E94 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFX4Q33E94 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX4Q33E94 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 TUBB8P12-201ENST00000308911 1335 ntBASIC15.85■□□□□ 0.13
RFX4Q33E94 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX4Q33E94 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 TUBB7P-202ENST00000428444 1305 ntBASIC15.85■□□□□ 0.13
RFX4Q33E94 TUBB8P7-204ENST00000567960 1332 ntBASIC15.85■□□□□ 0.13
RFX4Q33E94 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFX4Q33E94 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFX4Q33E94 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFX4Q33E94 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RFX4Q33E94 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX4Q33E94 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AC132872.4-202ENST00000622924 2756 ntBASIC15.84■□□□□ 0.13
RFX4Q33E94 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX4Q33E94 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX4Q33E94 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 HOMER2P1-201ENST00000455653 964 ntBASIC15.84■□□□□ 0.13
RFX4Q33E94 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AL359075.1-203ENST00000462729 1002 ntBASIC15.84■□□□□ 0.13
RFX4Q33E94 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms