Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX7Q2KHR2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.44■□□□□ 0.86
RFX7Q2KHR2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX7Q2KHR2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 AL353732.1-201ENST00000569618 1459 ntBASIC20.43■□□□□ 0.86
RFX7Q2KHR2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 MPDU1-223ENST00000582151 728 ntBASIC20.43■□□□□ 0.86
RFX7Q2KHR2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX7Q2KHR2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 SLC22A20-204ENST00000530038 1673 ntBASIC20.42■□□□□ 0.86
RFX7Q2KHR2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 AL139400.1-201ENST00000366220 510 ntBASIC20.42■□□□□ 0.86
RFX7Q2KHR2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 HLA-J-202ENST00000469281 1241 ntBASIC20.42■□□□□ 0.86
RFX7Q2KHR2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.42■□□□□ 0.86
RFX7Q2KHR2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 AC022145.2-201ENST00000598203 171 ntBASIC20.42■□□□□ 0.86
RFX7Q2KHR2 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX7Q2KHR2 AC006277.1-201ENST00000624348 1610 ntBASIC20.42■□□□□ 0.86
RFX7Q2KHR2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 HCG4-201ENST00000418983 998 ntBASIC20.41■□□□□ 0.86
RFX7Q2KHR2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.41■□□□□ 0.86
RFX7Q2KHR2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX7Q2KHR2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 AL645728.1-201ENST00000366221 2101 ntBASIC20.4■□□□□ 0.86
RFX7Q2KHR2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms