Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL16A1Q07092 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC22.49■■□□□ 1.19
COL16A1Q07092 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.49■■□□□ 1.19
COL16A1Q07092 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.49■■□□□ 1.19
COL16A1Q07092 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.49■■□□□ 1.19
COL16A1Q07092 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.49■■□□□ 1.19
COL16A1Q07092 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL16A1Q07092 FLJ13224-201ENST00000313737 1514 ntBASIC22.49■■□□□ 1.19
COL16A1Q07092 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
COL16A1Q07092 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.49■■□□□ 1.19
COL16A1Q07092 RAD18-204ENST00000418463 563 ntTSL 4 BASIC22.49■■□□□ 1.19
COL16A1Q07092 RAD18-205ENST00000421052 582 ntTSL 3 BASIC22.49■■□□□ 1.19
COL16A1Q07092 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC22.49■■□□□ 1.19
COL16A1Q07092 AC098859.1-201ENST00000502915 1238 ntBASIC22.49■■□□□ 1.19
COL16A1Q07092 FOS-206ENST00000555347 1280 ntTSL 2 BASIC22.49■■□□□ 1.19
COL16A1Q07092 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL16A1Q07092 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.49■■□□□ 1.19
COL16A1Q07092 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC22.49■■□□□ 1.19
COL16A1Q07092 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
COL16A1Q07092 EGFEM1P-202ENST00000431685 1563 ntBASIC22.48■■□□□ 1.19
COL16A1Q07092 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.48■■□□□ 1.19
COL16A1Q07092 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.48■■□□□ 1.19
COL16A1Q07092 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL16A1Q07092 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL16A1Q07092 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL16A1Q07092 SLC25A1P3-201ENST00000395415 828 ntBASIC22.48■■□□□ 1.19
COL16A1Q07092 RPL7P3-201ENST00000441388 714 ntBASIC22.48■■□□□ 1.19
COL16A1Q07092 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
COL16A1Q07092 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
COL16A1Q07092 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC22.48■■□□□ 1.19
COL16A1Q07092 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC22.48■■□□□ 1.19
COL16A1Q07092 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
COL16A1Q07092 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC22.48■■□□□ 1.19
COL16A1Q07092 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC22.48■■□□□ 1.19
COL16A1Q07092 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC22.48■■□□□ 1.19
COL16A1Q07092 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
COL16A1Q07092 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC22.48■■□□□ 1.19
COL16A1Q07092 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL16A1Q07092 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL16A1Q07092 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL16A1Q07092 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC22.47■■□□□ 1.19
COL16A1Q07092 AGER-203ENST00000375065 665 ntTSL 2 BASIC22.47■■□□□ 1.19
COL16A1Q07092 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 SPDYE17-201ENST00000412399 783 ntBASIC22.47■■□□□ 1.19
COL16A1Q07092 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC22.47■■□□□ 1.19
COL16A1Q07092 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC22.47■■□□□ 1.19
COL16A1Q07092 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC22.47■■□□□ 1.19
COL16A1Q07092 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC22.47■■□□□ 1.19
COL16A1Q07092 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC22.47■■□□□ 1.19
COL16A1Q07092 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC22.47■■□□□ 1.19
COL16A1Q07092 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC22.47■■□□□ 1.19
COL16A1Q07092 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC22.47■■□□□ 1.19
COL16A1Q07092 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC22.47■■□□□ 1.19
COL16A1Q07092 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
COL16A1Q07092 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.47■■□□□ 1.19
COL16A1Q07092 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.47■■□□□ 1.19
COL16A1Q07092 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC22.47■■□□□ 1.19
COL16A1Q07092 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL16A1Q07092 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.46■■□□□ 1.19
COL16A1Q07092 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 CALR4P-201ENST00000431943 946 ntBASIC22.46■■□□□ 1.19
COL16A1Q07092 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC22.46■■□□□ 1.19
COL16A1Q07092 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
COL16A1Q07092 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.46■■□□□ 1.19
COL16A1Q07092 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.46■■□□□ 1.19
COL16A1Q07092 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 LOX-206ENST00000639739 1626 ntTSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
COL16A1Q07092 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC22.46■■□□□ 1.19
COL16A1Q07092 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL16A1Q07092 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC22.46■■□□□ 1.19
COL16A1Q07092 AL162726.2-201ENST00000438986 1017 ntBASIC22.46■■□□□ 1.19
COL16A1Q07092 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 AC105129.2-201ENST00000559536 390 ntBASIC22.46■■□□□ 1.19
COL16A1Q07092 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 SNX1-214ENST00000625244 324 ntTSL 5 BASIC22.46■■□□□ 1.19
COL16A1Q07092 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
COL16A1Q07092 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.45■■□□□ 1.19
COL16A1Q07092 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL16A1Q07092 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
COL16A1Q07092 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms