Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HTRA3P83110 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HTRA3P83110 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
HTRA3P83110 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HTRA3P83110 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.41■□□□□ 0.7
HTRA3P83110 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA3P83110 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.4■□□□□ 0.7
HTRA3P83110 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.4■□□□□ 0.7
HTRA3P83110 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.4■□□□□ 0.7
HTRA3P83110 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
HTRA3P83110 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HTRA3P83110 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HTRA3P83110 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HTRA3P83110 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 HIST2H2BC-201ENST00000498492 580 ntBASIC19.4■□□□□ 0.7
HTRA3P83110 AC104596.2-201ENST00000512793 793 ntBASIC19.4■□□□□ 0.7
HTRA3P83110 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HTRA3P83110 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.4■□□□□ 0.7
HTRA3P83110 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HTRA3P83110 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.4■□□□□ 0.7
HTRA3P83110 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.4■□□□□ 0.7
HTRA3P83110 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.4■□□□□ 0.7
HTRA3P83110 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HTRA3P83110 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HTRA3P83110 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA3P83110 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
HTRA3P83110 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.39■□□□□ 0.7
HTRA3P83110 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTRA3P83110 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTRA3P83110 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HTRA3P83110 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.39■□□□□ 0.7
HTRA3P83110 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.39■□□□□ 0.69
HTRA3P83110 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.39■□□□□ 0.69
HTRA3P83110 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HTRA3P83110 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HTRA3P83110 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.39■□□□□ 0.69
HTRA3P83110 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 SERBP1P3-201ENST00000459980 809 ntBASIC19.39■□□□□ 0.69
HTRA3P83110 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.39■□□□□ 0.69
HTRA3P83110 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.39■□□□□ 0.69
HTRA3P83110 RRP7BP-205ENST00000566851 833 ntBASIC19.39■□□□□ 0.69
HTRA3P83110 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.39■□□□□ 0.69
HTRA3P83110 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.39■□□□□ 0.69
HTRA3P83110 CU634019.7-201ENST00000624153 1185 ntBASIC19.39■□□□□ 0.69
HTRA3P83110 FP236241.2-201ENST00000624906 1185 ntBASIC19.39■□□□□ 0.69
HTRA3P83110 AC244452.3-201ENST00000636814 210 ntBASIC19.39■□□□□ 0.69
HTRA3P83110 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
HTRA3P83110 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.39■□□□□ 0.69
HTRA3P83110 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.39■□□□□ 0.69
HTRA3P83110 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.39■□□□□ 0.69
HTRA3P83110 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.39■□□□□ 0.69
HTRA3P83110 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.39■□□□□ 0.69
HTRA3P83110 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA3P83110 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
HTRA3P83110 ACTG1P3-201ENST00000431775 1114 ntBASIC19.38■□□□□ 0.69
HTRA3P83110 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.38■□□□□ 0.69
HTRA3P83110 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.38■□□□□ 0.69
HTRA3P83110 IMP3P2-201ENST00000489760 475 ntBASIC19.38■□□□□ 0.69
HTRA3P83110 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTRA3P83110 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.38■□□□□ 0.69
HTRA3P83110 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC19.38■□□□□ 0.69
HTRA3P83110 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms