Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.78■□□□□ 0.76
IRX3P78415 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
IRX3P78415 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.78■□□□□ 0.76
IRX3P78415 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.78■□□□□ 0.76
IRX3P78415 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.77■□□□□ 0.76
IRX3P78415 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.77■□□□□ 0.76
IRX3P78415 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.77■□□□□ 0.76
IRX3P78415 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.77■□□□□ 0.76
IRX3P78415 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.77■□□□□ 0.76
IRX3P78415 TFAMP1-201ENST00000412727 736 ntBASIC19.77■□□□□ 0.76
IRX3P78415 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.77■□□□□ 0.76
IRX3P78415 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.77■□□□□ 0.76
IRX3P78415 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.77■□□□□ 0.76
IRX3P78415 AC015911.4-201ENST00000588022 1070 ntBASIC19.77■□□□□ 0.76
IRX3P78415 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.77■□□□□ 0.76
IRX3P78415 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.77■□□□□ 0.76
IRX3P78415 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
IRX3P78415 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX3P78415 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
IRX3P78415 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
IRX3P78415 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.77■□□□□ 0.75
IRX3P78415 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.77■□□□□ 0.75
IRX3P78415 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
IRX3P78415 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
IRX3P78415 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.76■□□□□ 0.75
IRX3P78415 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
IRX3P78415 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.76■□□□□ 0.75
IRX3P78415 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
IRX3P78415 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 KRT18P32-201ENST00000424695 1287 ntBASIC19.76■□□□□ 0.75
IRX3P78415 CNN2P2-201ENST00000443536 909 ntBASIC19.76■□□□□ 0.75
IRX3P78415 CNN2P3-201ENST00000450201 906 ntBASIC19.76■□□□□ 0.75
IRX3P78415 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
IRX3P78415 AC079140.1-201ENST00000508039 487 ntBASIC19.76■□□□□ 0.75
IRX3P78415 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.76■□□□□ 0.75
IRX3P78415 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.76■□□□□ 0.75
IRX3P78415 MIR4745-201ENST00000577608 62 ntBASIC19.76■□□□□ 0.75
IRX3P78415 MIR4515-201ENST00000584082 81 ntBASIC19.76■□□□□ 0.75
IRX3P78415 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.76■□□□□ 0.75
IRX3P78415 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.76■□□□□ 0.75
IRX3P78415 AL136317.3-201ENST00000618497 906 ntBASIC19.76■□□□□ 0.75
IRX3P78415 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.76■□□□□ 0.75
IRX3P78415 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
IRX3P78415 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
IRX3P78415 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX3P78415 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
IRX3P78415 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX3P78415 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.75■□□□□ 0.75
IRX3P78415 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX3P78415 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
IRX3P78415 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.75■□□□□ 0.75
IRX3P78415 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX3P78415 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.75■□□□□ 0.75
IRX3P78415 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.75■□□□□ 0.75
IRX3P78415 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.75■□□□□ 0.75
IRX3P78415 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.75■□□□□ 0.75
IRX3P78415 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.75■□□□□ 0.75
IRX3P78415 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX3P78415 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
IRX3P78415 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX3P78415 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms