Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEP78395 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEP78395 AL022326.1-202ENST00000641533 845 ntBASIC17.19■□□□□ 0.34
PRAMEP78395 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEP78395 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEP78395 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEP78395 FRMD8P1-201ENST00000440433 1524 ntBASIC17.18■□□□□ 0.34
PRAMEP78395 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEP78395 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEP78395 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEP78395 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 PRYP5-201ENST00000451909 266 ntBASIC17.18■□□□□ 0.34
PRAMEP78395 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PRAMEP78395 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEP78395 NKAPP1-205ENST00000585790 367 ntBASIC17.18■□□□□ 0.34
PRAMEP78395 AC008608.2-201ENST00000606089 416 ntBASIC17.18■□□□□ 0.34
PRAMEP78395 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEP78395 AL355877.3-201ENST00000622820 899 ntBASIC17.18■□□□□ 0.34
PRAMEP78395 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEP78395 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEP78395 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PRAMEP78395 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEP78395 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PRAMEP78395 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PRAMEP78395 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEP78395 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEP78395 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEP78395 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 AC046158.3-201ENST00000624947 2558 ntBASIC17.17■□□□□ 0.34
PRAMEP78395 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEP78395 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEP78395 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEP78395 AL118508.1-201ENST00000613502 2345 ntBASIC17.16■□□□□ 0.34
PRAMEP78395 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.16■□□□□ 0.34
PRAMEP78395 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PRAMEP78395 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEP78395 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 NCF1C-201ENST00000438382 1427 ntBASIC17.16■□□□□ 0.34
PRAMEP78395 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 UBALD1-205ENST00000590891 2641 ntBASIC17.16■□□□□ 0.34
PRAMEP78395 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEP78395 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEP78395 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEP78395 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEP78395 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.16■□□□□ 0.34
PRAMEP78395 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEP78395 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEP78395 CLEC4GP1-201ENST00000596555 870 ntBASIC17.16■□□□□ 0.34
PRAMEP78395 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEP78395 REXO1L6P-202ENST00000619970 1078 ntBASIC17.16■□□□□ 0.34
PRAMEP78395 AC012313.10-201ENST00000623509 926 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms