Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
UBA52P62987 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBA52P62987 CYP2T1P-202ENST00000641596 2535 ntBASIC14.75□□□□□ -0.05
UBA52P62987 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 MRPL3P1-201ENST00000400109 1033 ntBASIC14.75□□□□□ -0.05
UBA52P62987 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.75□□□□□ -0.05
UBA52P62987 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 AC024563.2-201ENST00000603282 481 ntBASIC14.75□□□□□ -0.05
UBA52P62987 AC124864.1-201ENST00000623408 392 ntBASIC14.75□□□□□ -0.05
UBA52P62987 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.75□□□□□ -0.05
UBA52P62987 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.75□□□□□ -0.05
UBA52P62987 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.75□□□□□ -0.05
UBA52P62987 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBA52P62987 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.74□□□□□ -0.05
UBA52P62987 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
UBA52P62987 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
UBA52P62987 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UBA52P62987 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
UBA52P62987 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.74□□□□□ -0.05
UBA52P62987 IGHV3-47-201ENST00000425060 335 ntBASIC14.74□□□□□ -0.05
UBA52P62987 SAPCD2P3-201ENST00000455031 850 ntBASIC14.74□□□□□ -0.05
UBA52P62987 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
UBA52P62987 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.74□□□□□ -0.05
UBA52P62987 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.74□□□□□ -0.05
UBA52P62987 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.74□□□□□ -0.05
UBA52P62987 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.74□□□□□ -0.05
UBA52P62987 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.74□□□□□ -0.05
UBA52P62987 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.74□□□□□ -0.05
UBA52P62987 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
UBA52P62987 AC120114.3-201ENST00000611923 658 ntBASIC14.74□□□□□ -0.05
UBA52P62987 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.74□□□□□ -0.05
UBA52P62987 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
UBA52P62987 AC105917.1-201ENST00000506637 2539 ntBASIC14.74□□□□□ -0.05
UBA52P62987 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UBA52P62987 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
UBA52P62987 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.74□□□□□ -0.05
UBA52P62987 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UBA52P62987 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UBA52P62987 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 AC006449.5-201ENST00000610658 2098 ntBASIC14.73□□□□□ -0.05
UBA52P62987 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
UBA52P62987 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms