Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.96□□□□□ -0.01
SEC61A1P61619 AC091304.2-201ENST00000564639 760 ntBASIC14.96□□□□□ -0.01
SEC61A1P61619 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.96□□□□□ -0.01
SEC61A1P61619 AC005336.2-201ENST00000593183 939 ntBASIC14.96□□□□□ -0.01
SEC61A1P61619 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.96□□□□□ -0.01
SEC61A1P61619 AL353801.3-201ENST00000609898 542 ntBASIC14.96□□□□□ -0.01
SEC61A1P61619 AL121772.3-201ENST00000610840 674 ntBASIC14.96□□□□□ -0.01
SEC61A1P61619 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.96□□□□□ -0.01
SEC61A1P61619 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.96□□□□□ -0.01
SEC61A1P61619 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SEC61A1P61619 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.96□□□□□ -0.01
SEC61A1P61619 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SEC61A1P61619 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.96□□□□□ -0.01
SEC61A1P61619 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEC61A1P61619 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEC61A1P61619 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.96□□□□□ -0.02
SEC61A1P61619 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEC61A1P61619 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEC61A1P61619 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEC61A1P61619 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEC61A1P61619 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
SEC61A1P61619 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SEC61A1P61619 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SEC61A1P61619 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SEC61A1P61619 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SEC61A1P61619 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.95□□□□□ -0.02
SEC61A1P61619 TPM4P1-201ENST00000436100 807 ntBASIC14.95□□□□□ -0.02
SEC61A1P61619 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.95□□□□□ -0.02
SEC61A1P61619 MTCL1P1-201ENST00000446207 792 ntBASIC14.95□□□□□ -0.02
SEC61A1P61619 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.95□□□□□ -0.02
SEC61A1P61619 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.95□□□□□ -0.02
SEC61A1P61619 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.95□□□□□ -0.02
SEC61A1P61619 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SEC61A1P61619 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 AC007950.2-201ENST00000615045 2347 ntBASIC14.95□□□□□ -0.02
SEC61A1P61619 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SEC61A1P61619 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SEC61A1P61619 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.95□□□□□ -0.02
SEC61A1P61619 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.95□□□□□ -0.02
SEC61A1P61619 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.95□□□□□ -0.02
SEC61A1P61619 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SEC61A1P61619 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
SEC61A1P61619 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.94□□□□□ -0.02
SEC61A1P61619 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SEC61A1P61619 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SEC61A1P61619 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.94□□□□□ -0.02
SEC61A1P61619 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SEC61A1P61619 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
SEC61A1P61619 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SEC61A1P61619 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.94□□□□□ -0.02
SEC61A1P61619 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.94□□□□□ -0.02
SEC61A1P61619 EMBP1-201ENST00000458200 901 ntBASIC14.94□□□□□ -0.02
SEC61A1P61619 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
SEC61A1P61619 AC096582.2-201ENST00000510860 516 ntBASIC14.94□□□□□ -0.02
SEC61A1P61619 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 BNIP3P18-201ENST00000593976 575 ntBASIC14.94□□□□□ -0.02
SEC61A1P61619 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.94□□□□□ -0.02
SEC61A1P61619 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SEC61A1P61619 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.94□□□□□ -0.02
SEC61A1P61619 AC005052.1-201ENST00000625181 2492 ntBASIC14.94□□□□□ -0.02
SEC61A1P61619 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SEC61A1P61619 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SEC61A1P61619 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SEC61A1P61619 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms