Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CDC42P60953 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDC42P60953 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDC42P60953 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC42P60953 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.6■□□□□ 0.09
CDC42P60953 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDC42P60953 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC42P60953 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC42P60953 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.6■□□□□ 0.09
CDC42P60953 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CDC42P60953 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC42P60953 AC140113.3-201ENST00000605663 199 ntBASIC15.6■□□□□ 0.09
CDC42P60953 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
CDC42P60953 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC42P60953 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC42P60953 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC42P60953 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC42P60953 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC42P60953 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.59■□□□□ 0.09
CDC42P60953 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 AC126755.1-201ENST00000525846 6405 ntBASIC15.59■□□□□ 0.09
CDC42P60953 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.59■□□□□ 0.09
CDC42P60953 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDC42P60953 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDC42P60953 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.59■□□□□ 0.09
CDC42P60953 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDC42P60953 AC007967.3-201ENST00000434308 558 ntBASIC15.59■□□□□ 0.09
CDC42P60953 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDC42P60953 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
CDC42P60953 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.59■□□□□ 0.09
CDC42P60953 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDC42P60953 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC42P60953 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CDC42P60953 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDC42P60953 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.58■□□□□ 0.09
CDC42P60953 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDC42P60953 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDC42P60953 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.58■□□□□ 0.09
CDC42P60953 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDC42P60953 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC42P60953 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CDC42P60953 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CDC42P60953 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC42P60953 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC42P60953 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.58■□□□□ 0.08
CDC42P60953 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC42P60953 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC42P60953 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDC42P60953 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC42P60953 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.58■□□□□ 0.08
CDC42P60953 AC103564.2-201ENST00000432853 1299 ntBASIC15.58■□□□□ 0.08
CDC42P60953 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.58■□□□□ 0.08
CDC42P60953 SNORA78-201ENST00000459373 127 ntBASIC15.58■□□□□ 0.08
CDC42P60953 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC42P60953 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC42P60953 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms