Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.42■■□□□ 1.02
KCNQ4P56696 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KCNQ4P56696 AC090164.3-201ENST00000610780 2143 ntBASIC21.42■■□□□ 1.02
KCNQ4P56696 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.42■■□□□ 1.02
KCNQ4P56696 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
KCNQ4P56696 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNQ4P56696 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KCNQ4P56696 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
KCNQ4P56696 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KCNQ4P56696 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNQ4P56696 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNQ4P56696 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.41■■□□□ 1.02
KCNQ4P56696 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
KCNQ4P56696 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.41■■□□□ 1.02
KCNQ4P56696 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
KCNQ4P56696 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.41■■□□□ 1.02
KCNQ4P56696 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 TMEM14DP-201ENST00000422205 345 ntBASIC21.41■■□□□ 1.02
KCNQ4P56696 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNQ4P56696 CYP2A7P1-201ENST00000595391 815 ntBASIC21.41■■□□□ 1.02
KCNQ4P56696 AL133215.2-201ENST00000609242 977 ntBASIC21.41■■□□□ 1.02
KCNQ4P56696 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.41■■□□□ 1.02
KCNQ4P56696 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNQ4P56696 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.4■■□□□ 1.02
KCNQ4P56696 REXO1L6P-201ENST00000603433 1515 ntBASIC21.4■■□□□ 1.02
KCNQ4P56696 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.4■■□□□ 1.02
KCNQ4P56696 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 HLA-H-201ENST00000383620 1096 ntBASIC21.4■■□□□ 1.02
KCNQ4P56696 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
KCNQ4P56696 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.4■■□□□ 1.02
KCNQ4P56696 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
KCNQ4P56696 DFFBP1-201ENST00000433250 979 ntBASIC21.4■■□□□ 1.02
KCNQ4P56696 AC119751.2-201ENST00000504529 210 ntBASIC21.4■■□□□ 1.02
KCNQ4P56696 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.4■■□□□ 1.02
KCNQ4P56696 AC007431.3-201ENST00000623221 587 ntBASIC21.4■■□□□ 1.02
KCNQ4P56696 AL033527.4-201ENST00000641026 673 ntBASIC21.4■■□□□ 1.02
KCNQ4P56696 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
KCNQ4P56696 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.4■■□□□ 1.02
KCNQ4P56696 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNQ4P56696 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KCNQ4P56696 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KCNQ4P56696 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KCNQ4P56696 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.39■■□□□ 1.02
KCNQ4P56696 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
KCNQ4P56696 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.39■■□□□ 1.02
KCNQ4P56696 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KCNQ4P56696 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.39■■□□□ 1.02
KCNQ4P56696 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
KCNQ4P56696 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.39■■□□□ 1.02
KCNQ4P56696 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KCNQ4P56696 AL035456.1-201ENST00000456064 1369 ntBASIC21.39■■□□□ 1.02
KCNQ4P56696 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.39■■□□□ 1.01
KCNQ4P56696 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
KCNQ4P56696 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.39■■□□□ 1.01
KCNQ4P56696 AL080243.2-201ENST00000418783 582 ntBASIC21.39■■□□□ 1.01
KCNQ4P56696 AL353705.2-201ENST00000428243 662 ntBASIC21.39■■□□□ 1.01
KCNQ4P56696 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.39■■□□□ 1.01
KCNQ4P56696 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.39■■□□□ 1.01
KCNQ4P56696 RN7SL837P-201ENST00000463010 287 ntBASIC21.39■■□□□ 1.01
KCNQ4P56696 KRT18P34-201ENST00000488218 1270 ntBASIC21.39■■□□□ 1.01
KCNQ4P56696 PRYP6-201ENST00000514804 343 ntBASIC21.39■■□□□ 1.01
KCNQ4P56696 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.39■■□□□ 1.01
KCNQ4P56696 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.39■■□□□ 1.01
KCNQ4P56696 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.39■■□□□ 1.01
KCNQ4P56696 AC105021.1-202ENST00000570572 669 ntBASIC21.39■■□□□ 1.01
KCNQ4P56696 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.39■■□□□ 1.01
KCNQ4P56696 AC084346.2-201ENST00000607097 949 ntBASIC21.39■■□□□ 1.01
KCNQ4P56696 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.39■■□□□ 1.01
KCNQ4P56696 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms