Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PEX3P56589 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PEX3P56589 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PEX3P56589 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX3P56589 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 KRT8P49-201ENST00000604166 1432 ntBASIC18.69■□□□□ 0.58
PEX3P56589 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX3P56589 RHOQP3-201ENST00000437982 621 ntBASIC18.69■□□□□ 0.58
PEX3P56589 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.69■□□□□ 0.58
PEX3P56589 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX3P56589 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PEX3P56589 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.69■□□□□ 0.58
PEX3P56589 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX3P56589 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.69■□□□□ 0.58
PEX3P56589 PCDHB17P-201ENST00000539533 2393 ntBASIC18.69■□□□□ 0.58
PEX3P56589 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PEX3P56589 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PEX3P56589 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX3P56589 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
PEX3P56589 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX3P56589 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 LTB4R2-202ENST00000528054 3092 ntBASIC18.68■□□□□ 0.58
PEX3P56589 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX3P56589 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX3P56589 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PEX3P56589 AC023274.1-201ENST00000418278 595 ntBASIC18.68■□□□□ 0.58
PEX3P56589 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX3P56589 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX3P56589 AL513480.1-201ENST00000451731 511 ntBASIC18.68■□□□□ 0.58
PEX3P56589 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX3P56589 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.68■□□□□ 0.58
PEX3P56589 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX3P56589 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX3P56589 AC004877.2-201ENST00000623941 599 ntBASIC18.68■□□□□ 0.58
PEX3P56589 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PEX3P56589 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX3P56589 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX3P56589 TUBB8P12-201ENST00000308911 1335 ntBASIC18.68■□□□□ 0.58
PEX3P56589 TUBB7P-202ENST00000428444 1305 ntBASIC18.68■□□□□ 0.58
PEX3P56589 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.68■□□□□ 0.58
PEX3P56589 TUBB8P7-204ENST00000567960 1332 ntBASIC18.68■□□□□ 0.58
PEX3P56589 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PEX3P56589 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PEX3P56589 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PEX3P56589 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.67■□□□□ 0.58
PEX3P56589 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.67■□□□□ 0.58
PEX3P56589 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.67■□□□□ 0.58
PEX3P56589 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX3P56589 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.67■□□□□ 0.58
PEX3P56589 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.67■□□□□ 0.58
PEX3P56589 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 AL513190.1-201ENST00000621254 727 ntBASIC18.67■□□□□ 0.58
PEX3P56589 AC092865.6-201ENST00000642101 219 ntBASIC18.67■□□□□ 0.58
PEX3P56589 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PEX3P56589 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms