Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHB3P54753 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.68■□□□□ 0.42
EPHB3P54753 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB3P54753 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPHB3P54753 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB3P54753 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB3P54753 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPHB3P54753 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB3P54753 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHB3P54753 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
EPHB3P54753 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB3P54753 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHB3P54753 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
EPHB3P54753 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
EPHB3P54753 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.67■□□□□ 0.42
EPHB3P54753 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
EPHB3P54753 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
EPHB3P54753 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB3P54753 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.67■□□□□ 0.42
EPHB3P54753 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB3P54753 SPCS2P4-201ENST00000436160 681 ntBASIC17.67■□□□□ 0.42
EPHB3P54753 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.67■□□□□ 0.42
EPHB3P54753 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.67■□□□□ 0.42
EPHB3P54753 AC067863.1-201ENST00000494933 530 ntBASIC17.67■□□□□ 0.42
EPHB3P54753 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.67■□□□□ 0.42
EPHB3P54753 KRT8P23-201ENST00000560090 1207 ntBASIC17.67■□□□□ 0.42
EPHB3P54753 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.67■□□□□ 0.42
EPHB3P54753 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.67■□□□□ 0.42
EPHB3P54753 MIR3909-201ENST00000579518 119 ntBASIC17.67■□□□□ 0.42
EPHB3P54753 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
EPHB3P54753 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
EPHB3P54753 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB3P54753 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB3P54753 UXT-AS1-201ENST00000590504 1525 ntBASIC17.67■□□□□ 0.42
EPHB3P54753 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
EPHB3P54753 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.67■□□□□ 0.42
EPHB3P54753 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
EPHB3P54753 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.66■□□□□ 0.42
EPHB3P54753 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.66■□□□□ 0.42
EPHB3P54753 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB3P54753 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB3P54753 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB3P54753 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 LINC02084-201ENST00000606069 1096 ntBASIC17.66■□□□□ 0.42
EPHB3P54753 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB3P54753 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB3P54753 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB3P54753 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB3P54753 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB3P54753 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHB3P54753 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.65■□□□□ 0.42
EPHB3P54753 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 FAM58DP-201ENST00000428076 619 ntBASIC17.65■□□□□ 0.42
EPHB3P54753 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 CNN2P2-201ENST00000443536 909 ntBASIC17.65■□□□□ 0.42
EPHB3P54753 CNN2P3-201ENST00000450201 906 ntBASIC17.65■□□□□ 0.42
EPHB3P54753 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EPHB3P54753 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.65■□□□□ 0.42
EPHB3P54753 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms