Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.752e-6■□□□□ 9.3
NCBP2P52298 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.72■□□□□ 0.272e-6■□□□□ 9.3
NCBP2P52298 NEMF-210ENST00000556672 590 ntTSL 2 BASIC10.94□□□□□ -0.663e-7■□□□□ 9.3
NCBP2P52298 NEMF-203ENST00000554162 492 ntTSL 510.61□□□□□ -0.713e-7■□□□□ 9.3
NCBP2P52298 NEMF-215ENST00000557380 1742 ntTSL 1 (best)8.1□□□□□ -1.113e-7■□□□□ 9.3
NCBP2P52298 NEMF-208ENST00000555970 3029 ntTSL 26.78□□□□□ -1.323e-7■□□□□ 9.3
NCBP2P52298 NEMF-205ENST00000554626 570 ntTSL 56.31□□□□□ -1.43e-7■□□□□ 9.3
NCBP2P52298 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.553e-7■□□□□ 9.3
NCBP2P52298 EPS8L2-212ENST00000528770 2233 ntTSL 216.86■□□□□ 0.294e-7■□□□□ 9.3
NCBP2P52298 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC11.61□□□□□ -0.551e-8■□□□□ 9.3
NCBP2P52298 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.97□□□□□ -0.011e-11■□□□□ 9.3
NCBP2P52298 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.79□□□□□ -0.041e-11■□□□□ 9.3
NCBP2P52298 RAB30-AS1-201ENST00000501011 607 ntTSL 1 (best)11.13□□□□□ -0.631e-11■□□□□ 9.3
NCBP2P52298 RAB30-AS1-203ENST00000527627 504 ntTSL 311.13□□□□□ -0.631e-11■□□□□ 9.3
NCBP2P52298 RAB30-AS1-206ENST00000533528 340 ntTSL 58.92□□□□□ -0.981e-11■□□□□ 9.3
NCBP2P52298 RAB30-AS1-208ENST00000534499 597 ntTSL 28.4□□□□□ -1.061e-11■□□□□ 9.3
NCBP2P52298 MKL2-204ENST00000572400 4351 ntTSL 27.23□□□□□ -1.252e-6■□□□□ 9.3
NCBP2P52298 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.322e-6■□□□□ 9.3
NCBP2P52298 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.42e-6■□□□□ 9.3
NCBP2P52298 MKL2-211ENST00000575537 618 ntTSL 55.94□□□□□ -1.462e-6■□□□□ 9.3
NCBP2P52298 MKL2-210ENST00000574998 545 ntTSL 45.37□□□□□ -1.552e-6■□□□□ 9.3
NCBP2P52298 DPY19L4-204ENST00000520774 581 ntTSL 522.46■■□□□ 1.192e-11■□□□□ 9.3
NCBP2P52298 DPY19L4-206ENST00000522422 680 ntTSL 321.97■■□□□ 1.112e-11■□□□□ 9.3
NCBP2P52298 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.932e-11■□□□□ 9.3
NCBP2P52298 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.028e-7■□□□□ 9.3
NCBP2P52298 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.048e-7■□□□□ 9.3
NCBP2P52298 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.088e-7■□□□□ 9.3
NCBP2P52298 EPS8L2-208ENST00000526909 3844 ntTSL 511.65□□□□□ -0.548e-7■□□□□ 9.3
NCBP2P52298 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.54e-16■□□□□ 9.3
NCBP2P52298 DCAF16-203ENST00000507768 757 ntTSL 217.87■□□□□ 0.454e-16■□□□□ 9.3
NCBP2P52298 DCAF16-202ENST00000507731 533 ntTSL 216.25■□□□□ 0.194e-16■□□□□ 9.3
NCBP2P52298 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.394e-16■□□□□ 9.3
NCBP2P52298 EFNA1-203ENST00000469878 1288 ntTSL 312.25□□□□□ -0.454e-16■□□□□ 9.3
NCBP2P52298 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC11.85□□□□□ -0.514e-16■□□□□ 9.3
NCBP2P52298 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.468e-11■□□□□ 9.3
NCBP2P52298 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.07■□□□□ 0.328e-11■□□□□ 9.3
NCBP2P52298 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.478e-11■□□□□ 9.3
NCBP2P52298 ZFC3H1-212ENST00000552994 7597 ntTSL 1 (best)12□□□□□ -0.498e-11■□□□□ 9.3
NCBP2P52298 ZFC3H1-208ENST00000550712 571 ntTSL 44.12□□□□□ -1.758e-11■□□□□ 9.3
NCBP2P52298 ZNF7-210ENST00000530082 581 ntTSL 318.54■□□□□ 0.563e-6■□□□□ 9.3
NCBP2P52298 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.1■□□□□ 0.173e-6■□□□□ 9.3
NCBP2P52298 ZNF7-212ENST00000530776 546 ntTSL 416.1■□□□□ 0.173e-6■□□□□ 9.3
NCBP2P52298 ZNF7-214ENST00000532382 855 ntTSL 316.01■□□□□ 0.153e-6■□□□□ 9.3
NCBP2P52298 ZNF7-216ENST00000532777 915 ntTSL 1 (best)15.27■□□□□ 0.043e-6■□□□□ 9.3
NCBP2P52298 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.043e-6■□□□□ 9.3
NCBP2P52298 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.69□□□□□ -0.063e-6■□□□□ 9.3
NCBP2P52298 ZNF7-208ENST00000529767 546 ntTSL 414.52□□□□□ -0.093e-6■□□□□ 9.3
NCBP2P52298 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.12□□□□□ -0.153e-6■□□□□ 9.3
NCBP2P52298 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.173e-6■□□□□ 9.3
NCBP2P52298 ZNF7-213ENST00000532051 540 ntTSL 413.87□□□□□ -0.193e-6■□□□□ 9.3
NCBP2P52298 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC11.53□□□□□ -0.563e-6■□□□□ 9.3
NCBP2P52298 ZNF7-217ENST00000533314 516 ntTSL 411.37□□□□□ -0.593e-6■□□□□ 9.3
NCBP2P52298 ZNF7-211ENST00000530682 581 ntTSL 411.09□□□□□ -0.633e-6■□□□□ 9.3
NCBP2P52298 ZNF7-204ENST00000527218 545 ntTSL 410.69□□□□□ -0.73e-6■□□□□ 9.3
NCBP2P52298 ZNF7-215ENST00000532393 569 ntTSL 48.08□□□□□ -1.123e-6■□□□□ 9.3
NCBP2P52298 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.77□□□□□ -1.493e-6■□□□□ 9.3
NCBP2P52298 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.573e-6■□□□□ 9.3
NCBP2P52298 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)11.29□□□□□ -0.61e-12■□□□□ 9.3
NCBP2P52298 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.021e-12■□□□□ 9.3
NCBP2P52298 AC087380.1-201ENST00000420465 1001 ntTSL 36.86□□□□□ -1.311e-12■□□□□ 9.3
NCBP2P52298 AC087380.1-203ENST00000420726 752 ntTSL 55.71□□□□□ -1.51e-12■□□□□ 9.3
NCBP2P52298 HBE1-203ENST00000396895 578 ntTSL 55.15□□□□□ -1.591e-12■□□□□ 9.3
NCBP2P52298 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.51□□□□□ -1.691e-12■□□□□ 9.3
NCBP2P52298 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.292e-8■□□□□ 9.3
NCBP2P52298 C11orf54-210ENST00000531516 168 ntTSL 311.54□□□□□ -0.562e-8■□□□□ 9.3
NCBP2P52298 C11orf54-215ENST00000617482 2417 ntTSL 3 BASIC11.14□□□□□ -0.632e-8■□□□□ 9.3
NCBP2P52298 C11orf54-214ENST00000540113 2442 ntTSL 1 (best) BASIC10.89□□□□□ -0.672e-8■□□□□ 9.3
NCBP2P52298 C11orf54-209ENST00000530620 779 ntTSL 59.58□□□□□ -0.882e-8■□□□□ 9.3
NCBP2P52298 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.992e-8■□□□□ 9.3
NCBP2P52298 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.05□□□□□ -1.282e-8■□□□□ 9.3
NCBP2P52298 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.32e-8■□□□□ 9.3
NCBP2P52298 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.38□□□□□ -1.392e-8■□□□□ 9.3
NCBP2P52298 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.532e-8■□□□□ 9.3
NCBP2P52298 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.562e-8■□□□□ 9.3
NCBP2P52298 C11orf54-204ENST00000527003 552 ntTSL 53.57□□□□□ -1.842e-8■□□□□ 9.3
NCBP2P52298 C11orf54-213ENST00000533585 574 ntTSL 43.52□□□□□ -1.852e-8■□□□□ 9.3
NCBP2P52298 C11orf54-208ENST00000530279 552 ntTSL 43.49□□□□□ -1.852e-8■□□□□ 9.3
NCBP2P52298 C11orf54-211ENST00000531650 695 ntTSL 51.44□□□□□ -2.182e-8■□□□□ 9.3
NCBP2P52298 CYTH2-202ENST00000391881 1546 ntTSL 520.6■□□□□ 0.891e-6■□□□□ 9.3
NCBP2P52298 CYTH2-206ENST00000462117 540 ntTSL 417.18■□□□□ 0.341e-6■□□□□ 9.3
NCBP2P52298 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.151e-6■□□□□ 9.3
NCBP2P52298 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.62□□□□□ -0.071e-6■□□□□ 9.3
NCBP2P52298 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.211e-6■□□□□ 9.3
NCBP2P52298 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.251e-6■□□□□ 9.3
NCBP2P52298 CYTH2-205ENST00000460595 1026 ntTSL 313.52□□□□□ -0.251e-6■□□□□ 9.3
NCBP2P52298 CYTH2-210ENST00000493260 4652 ntTSL 511.83□□□□□ -0.521e-6■□□□□ 9.3
NCBP2P52298 CYTH2-208ENST00000474049 576 ntTSL 211.73□□□□□ -0.531e-6■□□□□ 9.3
NCBP2P52298 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.541e-6■□□□□ 9.3
NCBP2P52298 TMEM214-212ENST00000478980 572 ntTSL 28.55□□□□□ -1.044e-19■□□□□ 9.3
NCBP2P52298 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.84■□□□□ 0.133e-8■□□□□ 9.3
NCBP2P52298 TBRG4-205ENST00000471142 544 ntTSL 415.77■□□□□ 0.123e-8■□□□□ 9.3
NCBP2P52298 TBRG4-216ENST00000495078 548 ntTSL 415.77■□□□□ 0.123e-8■□□□□ 9.3
NCBP2P52298 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.66■□□□□ 0.13e-8■□□□□ 9.3
NCBP2P52298 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.033e-8■□□□□ 9.3
NCBP2P52298 TBRG4-204ENST00000461363 856 ntTSL 214.47□□□□□ -0.093e-8■□□□□ 9.3
NCBP2P52298 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.123e-8■□□□□ 9.3
NCBP2P52298 TBRG4-209ENST00000478532 945 ntTSL 511.9□□□□□ -0.53e-8■□□□□ 9.3
NCBP2P52298 TBRG4-206ENST00000475893 579 ntTSL 47.95□□□□□ -1.143e-8■□□□□ 9.3
NCBP2P52298 NSMCE2-204ENST00000518013 405 ntTSL 312.31□□□□□ -0.441e-7■□□□□ 9.3
NCBP2P52298 NSMCE2-212ENST00000523741 787 ntTSL 511.66□□□□□ -0.541e-7■□□□□ 9.3
Retrieved 100 of 18,329 protein–RNA pairs in 297.5 ms