Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.1■□□□□ 0.33
LSP1P33241 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.1■□□□□ 0.33
LSP1P33241 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 PPT1-215ENST00000641471 2368 ntBASIC17.1■□□□□ 0.33
LSP1P33241 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.1■□□□□ 0.33
LSP1P33241 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LSP1P33241 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LSP1P33241 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LSP1P33241 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.09■□□□□ 0.33
LSP1P33241 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 MYCLP1-201ENST00000372451 1075 ntBASIC17.09■□□□□ 0.33
LSP1P33241 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.09■□□□□ 0.33
LSP1P33241 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.09■□□□□ 0.33
LSP1P33241 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 AC142381.4-202ENST00000563973 229 ntBASIC17.09■□□□□ 0.33
LSP1P33241 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.09■□□□□ 0.33
LSP1P33241 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.09■□□□□ 0.33
LSP1P33241 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LSP1P33241 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.09■□□□□ 0.33
LSP1P33241 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSP1P33241 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.09■□□□□ 0.33
LSP1P33241 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.09■□□□□ 0.33
LSP1P33241 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.09■□□□□ 0.33
LSP1P33241 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.08■□□□□ 0.33
LSP1P33241 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LSP1P33241 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSP1P33241 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.08■□□□□ 0.33
LSP1P33241 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
LSP1P33241 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSP1P33241 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LSP1P33241 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LSP1P33241 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSP1P33241 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LSP1P33241 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSP1P33241 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSP1P33241 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.08■□□□□ 0.32
LSP1P33241 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.08■□□□□ 0.32
LSP1P33241 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.08■□□□□ 0.32
LSP1P33241 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.08■□□□□ 0.32
LSP1P33241 AL353719.1-201ENST00000566847 864 ntBASIC17.08■□□□□ 0.32
LSP1P33241 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LSP1P33241 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LSP1P33241 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSP1P33241 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSP1P33241 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.08■□□□□ 0.32
LSP1P33241 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LSP1P33241 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LSP1P33241 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
LSP1P33241 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LSP1P33241 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LSP1P33241 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LSP1P33241 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LSP1P33241 TUBB8P12-201ENST00000308911 1335 ntBASIC17.07■□□□□ 0.32
LSP1P33241 TUBB7P-202ENST00000428444 1305 ntBASIC17.07■□□□□ 0.32
LSP1P33241 TUBB8P7-204ENST00000567960 1332 ntBASIC17.07■□□□□ 0.32
LSP1P33241 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 CRYGFP-201ENST00000418459 633 ntBASIC17.07■□□□□ 0.32
LSP1P33241 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 AL158047.1-201ENST00000445918 881 ntBASIC17.07■□□□□ 0.32
LSP1P33241 HLA-J-202ENST00000469281 1241 ntBASIC17.07■□□□□ 0.32
LSP1P33241 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSP1P33241 AC116562.2-201ENST00000507042 360 ntBASIC17.07■□□□□ 0.32
LSP1P33241 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.07■□□□□ 0.32
LSP1P33241 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms