Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HOXA13P31271 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HOXA13P31271 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA13P31271 AC112191.1-201ENST00000523689 701 ntBASIC19.29■□□□□ 0.68
HOXA13P31271 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
HOXA13P31271 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
HOXA13P31271 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA13P31271 AC099522.2-201ENST00000607001 744 ntBASIC19.29■□□□□ 0.68
HOXA13P31271 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXA13P31271 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
HOXA13P31271 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA13P31271 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA13P31271 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA13P31271 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA13P31271 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA13P31271 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HOXA13P31271 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXA13P31271 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA13P31271 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA13P31271 AC012313.1-201ENST00000593393 3059 ntBASIC19.28■□□□□ 0.68
HOXA13P31271 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXA13P31271 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.28■□□□□ 0.68
HOXA13P31271 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXA13P31271 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HOXA13P31271 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HOXA13P31271 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HOXA13P31271 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
HOXA13P31271 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.28■□□□□ 0.68
HOXA13P31271 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 MPDU1-223ENST00000582151 728 ntBASIC19.28■□□□□ 0.68
HOXA13P31271 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HOXA13P31271 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HOXA13P31271 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HOXA13P31271 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 AL021920.2-201ENST00000624828 1351 ntBASIC19.28■□□□□ 0.68
HOXA13P31271 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA13P31271 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
HOXA13P31271 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA13P31271 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HOXA13P31271 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXA13P31271 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HOXA13P31271 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA13P31271 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXA13P31271 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXA13P31271 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HOXA13P31271 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA13P31271 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXA13P31271 AC254562.1-201ENST00000417586 456 ntBASIC19.27■□□□□ 0.68
HOXA13P31271 CNN2P11-201ENST00000429351 262 ntBASIC19.27■□□□□ 0.68
HOXA13P31271 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA13P31271 ACTG1P14-201ENST00000446382 1122 ntBASIC19.27■□□□□ 0.68
HOXA13P31271 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA13P31271 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXA13P31271 AC091167.2-201ENST00000579581 588 ntBASIC19.27■□□□□ 0.68
HOXA13P31271 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA13P31271 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXA13P31271 AC131009.4-201ENST00000624048 1740 ntBASIC19.27■□□□□ 0.68
HOXA13P31271 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA13P31271 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXA13P31271 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA13P31271 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.27■□□□□ 0.67
HOXA13P31271 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.27■□□□□ 0.67
HOXA13P31271 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
HOXA13P31271 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA13P31271 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.27■□□□□ 0.67
HOXA13P31271 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA13P31271 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
HOXA13P31271 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA13P31271 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXA13P31271 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HOXA13P31271 AC060834.1-201ENST00000443027 2032 ntBASIC19.26■□□□□ 0.67
HOXA13P31271 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms