Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.52■□□□□ 0.88
HOXA10P31260 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.52■□□□□ 0.88
HOXA10P31260 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXA10P31260 AL589739.1-201ENST00000607720 493 ntBASIC20.52■□□□□ 0.88
HOXA10P31260 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.52■□□□□ 0.88
HOXA10P31260 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.52■□□□□ 0.88
HOXA10P31260 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA10P31260 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.52■□□□□ 0.87
HOXA10P31260 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA10P31260 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
HOXA10P31260 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA10P31260 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA10P31260 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA10P31260 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HOXA10P31260 AC008764.6-201ENST00000595909 2069 ntBASIC20.51■□□□□ 0.87
HOXA10P31260 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 U91328.1-201ENST00000437528 223 ntBASIC20.51■□□□□ 0.87
HOXA10P31260 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXA10P31260 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA10P31260 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
HOXA10P31260 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXA10P31260 AC105021.1-202ENST00000570572 669 ntBASIC20.51■□□□□ 0.87
HOXA10P31260 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.51■□□□□ 0.87
HOXA10P31260 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA10P31260 AC013467.2-201ENST00000605472 835 ntBASIC20.51■□□□□ 0.87
HOXA10P31260 MIR6752-201ENST00000618442 71 ntBASIC20.51■□□□□ 0.87
HOXA10P31260 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXA10P31260 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXA10P31260 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA10P31260 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA10P31260 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA10P31260 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.51■□□□□ 0.87
HOXA10P31260 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA10P31260 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
HOXA10P31260 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HOXA10P31260 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HOXA10P31260 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA10P31260 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA10P31260 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HOXA10P31260 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA10P31260 AL080243.2-201ENST00000418783 582 ntBASIC20.5■□□□□ 0.87
HOXA10P31260 ARSEP1-201ENST00000420443 635 ntBASIC20.5■□□□□ 0.87
HOXA10P31260 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXA10P31260 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA10P31260 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.5■□□□□ 0.87
HOXA10P31260 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXA10P31260 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.5■□□□□ 0.87
HOXA10P31260 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.5■□□□□ 0.87
HOXA10P31260 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.5■□□□□ 0.87
HOXA10P31260 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.5■□□□□ 0.87
HOXA10P31260 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXA10P31260 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXA10P31260 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXA10P31260 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA10P31260 AC007541.1-201ENST00000570282 1469 ntBASIC20.5■□□□□ 0.87
HOXA10P31260 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA10P31260 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HOXA10P31260 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA10P31260 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXA10P31260 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HOXA10P31260 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA10P31260 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA10P31260 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXA10P31260 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HOXA10P31260 MTND6P24-201ENST00000440466 518 ntBASIC20.49■□□□□ 0.87
HOXA10P31260 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA10P31260 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXA10P31260 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXA10P31260 AC124947.2-201ENST00000547118 1133 ntBASIC20.49■□□□□ 0.87
HOXA10P31260 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
HOXA10P31260 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXA10P31260 AL079307.3-201ENST00000556114 283 ntBASIC20.49■□□□□ 0.87
HOXA10P31260 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms