Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.35□□□□□ -0.11
COL8A2P25067 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
COL8A2P25067 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.35□□□□□ -0.11
COL8A2P25067 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.35□□□□□ -0.11
COL8A2P25067 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 AP001160.2-201ENST00000596071 487 ntBASIC14.35□□□□□ -0.11
COL8A2P25067 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.35□□□□□ -0.11
COL8A2P25067 AC079781.4-201ENST00000641908 219 ntBASIC14.35□□□□□ -0.11
COL8A2P25067 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
COL8A2P25067 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.34□□□□□ -0.11
COL8A2P25067 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL8A2P25067 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 DNAJB3-202ENST00000449667 1266 ntBASIC14.34□□□□□ -0.11
COL8A2P25067 CEND1P1-201ENST00000451006 455 ntBASIC14.34□□□□□ -0.11
COL8A2P25067 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 AL596442.2-201ENST00000610240 980 ntBASIC14.34□□□□□ -0.11
COL8A2P25067 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.34□□□□□ -0.11
COL8A2P25067 CROCCP2-202ENST00000412962 2773 ntBASIC14.34□□□□□ -0.11
COL8A2P25067 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
COL8A2P25067 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL8A2P25067 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
COL8A2P25067 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
COL8A2P25067 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL8A2P25067 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.34□□□□□ -0.11
COL8A2P25067 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COL8A2P25067 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL8A2P25067 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL8A2P25067 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL8A2P25067 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.33□□□□□ -0.11
COL8A2P25067 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COL8A2P25067 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.33□□□□□ -0.12
COL8A2P25067 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.33□□□□□ -0.12
COL8A2P25067 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.33□□□□□ -0.12
COL8A2P25067 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.33□□□□□ -0.12
COL8A2P25067 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.33□□□□□ -0.12
COL8A2P25067 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
COL8A2P25067 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.33□□□□□ -0.12
COL8A2P25067 MKNK2P1-201ENST00000437526 628 ntBASIC14.33□□□□□ -0.12
COL8A2P25067 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
COL8A2P25067 YBX1P5-201ENST00000509441 847 ntBASIC14.33□□□□□ -0.12
COL8A2P25067 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 AL031432.2-201ENST00000566714 459 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms