Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 REXO1L6P-202ENST00000619970 1078 ntBASIC16.16■□□□□ 0.18
PRPH2P23942 REXO1L3P-201ENST00000622202 1288 ntBASIC16.16■□□□□ 0.18
PRPH2P23942 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PRPH2P23942 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRPH2P23942 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.15■□□□□ 0.18
PRPH2P23942 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PRPH2P23942 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.15■□□□□ 0.18
PRPH2P23942 UPK3BP1-201ENST00000428678 509 ntBASIC16.15■□□□□ 0.18
PRPH2P23942 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PRPH2P23942 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PRPH2P23942 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.15■□□□□ 0.18
PRPH2P23942 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.15■□□□□ 0.18
PRPH2P23942 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.15■□□□□ 0.18
PRPH2P23942 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.15■□□□□ 0.18
PRPH2P23942 MTDHP4-201ENST00000600287 670 ntBASIC16.15■□□□□ 0.18
PRPH2P23942 AC008608.2-201ENST00000606089 416 ntBASIC16.15■□□□□ 0.18
PRPH2P23942 MTHFR-217ENST00000641820 1569 ntBASIC16.15■□□□□ 0.18
PRPH2P23942 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.15■□□□□ 0.18
PRPH2P23942 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PRPH2P23942 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRPH2P23942 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRPH2P23942 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRPH2P23942 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.14■□□□□ 0.18
PRPH2P23942 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PRPH2P23942 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PRPH2P23942 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.14■□□□□ 0.17
PRPH2P23942 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 AL391005.1-201ENST00000623953 2435 ntBASIC16.14■□□□□ 0.17
PRPH2P23942 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.14■□□□□ 0.17
PRPH2P23942 HCG4P8-203ENST00000443049 980 ntBASIC16.14■□□□□ 0.17
PRPH2P23942 AC087163.2-201ENST00000457299 853 ntBASIC16.14■□□□□ 0.17
PRPH2P23942 SCARNA2-201ENST00000458748 420 ntBASIC16.14■□□□□ 0.17
PRPH2P23942 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PRPH2P23942 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.14■□□□□ 0.17
PRPH2P23942 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.14■□□□□ 0.17
PRPH2P23942 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 MPDU1-223ENST00000582151 728 ntBASIC16.14■□□□□ 0.17
PRPH2P23942 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.14■□□□□ 0.17
PRPH2P23942 AC018695.7-201ENST00000624587 2492 ntBASIC16.14■□□□□ 0.17
PRPH2P23942 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PRPH2P23942 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.14■□□□□ 0.17
PRPH2P23942 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRPH2P23942 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.14■□□□□ 0.17
PRPH2P23942 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRPH2P23942 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.14■□□□□ 0.17
PRPH2P23942 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 ALOX12P2-203ENST00000570921 1945 ntBASIC16.13■□□□□ 0.17
PRPH2P23942 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 AC002310.6-201ENST00000624451 1377 ntBASIC16.13■□□□□ 0.17
PRPH2P23942 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PRPH2P23942 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 AL513523.2-202ENST00000427283 2040 ntBASIC16.13■□□□□ 0.17
PRPH2P23942 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms