Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.15■□□□□ 0.34
XPAP23025 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 AC018845.2-201ENST00000568326 409 ntBASIC17.15■□□□□ 0.34
XPAP23025 AC002347.1-201ENST00000569543 541 ntBASIC17.15■□□□□ 0.34
XPAP23025 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.15■□□□□ 0.34
XPAP23025 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.15■□□□□ 0.34
XPAP23025 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.15■□□□□ 0.34
XPAP23025 AC116353.5-201ENST00000638148 1699 ntBASIC17.15■□□□□ 0.34
XPAP23025 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
XPAP23025 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.14■□□□□ 0.33
XPAP23025 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
XPAP23025 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.14■□□□□ 0.33
XPAP23025 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
XPAP23025 KRT18P13-201ENST00000400056 1290 ntBASIC17.14■□□□□ 0.33
XPAP23025 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.14■□□□□ 0.33
XPAP23025 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.14■□□□□ 0.33
XPAP23025 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.14■□□□□ 0.33
XPAP23025 CXCL1P1-201ENST00000502804 216 ntBASIC17.14■□□□□ 0.33
XPAP23025 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.14■□□□□ 0.33
XPAP23025 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.14■□□□□ 0.33
XPAP23025 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.14■□□□□ 0.33
XPAP23025 AC023511.2-201ENST00000618803 211 ntBASIC17.14■□□□□ 0.33
XPAP23025 AC007064.4-201ENST00000637740 555 ntBASIC17.14■□□□□ 0.33
XPAP23025 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
XPAP23025 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
XPAP23025 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.14■□□□□ 0.33
XPAP23025 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 AC129492.6-201ENST00000611383 1305 ntBASIC17.14■□□□□ 0.33
XPAP23025 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.14■□□□□ 0.33
XPAP23025 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XPAP23025 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
XPAP23025 AL023806.1-201ENST00000603994 1649 ntBASIC17.14■□□□□ 0.33
XPAP23025 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.13■□□□□ 0.33
XPAP23025 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XPAP23025 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XPAP23025 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XPAP23025 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XPAP23025 KRT18P2-201ENST00000447938 1258 ntBASIC17.13■□□□□ 0.33
XPAP23025 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.13■□□□□ 0.33
XPAP23025 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.13■□□□□ 0.33
XPAP23025 PGAM5P1-201ENST00000518923 814 ntBASIC17.13■□□□□ 0.33
XPAP23025 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.13■□□□□ 0.33
XPAP23025 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
XPAP23025 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
XPAP23025 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XPAP23025 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XPAP23025 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.13■□□□□ 0.33
XPAP23025 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XPAP23025 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
XPAP23025 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.12■□□□□ 0.33
XPAP23025 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.12■□□□□ 0.33
XPAP23025 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
XPAP23025 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
XPAP23025 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms