Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.86■□□□□ 0.45
MMP8P22894 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MMP8P22894 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP8P22894 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP8P22894 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MMP8P22894 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
MMP8P22894 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MMP8P22894 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP8P22894 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP8P22894 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP8P22894 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP8P22894 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MMP8P22894 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MMP8P22894 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP8P22894 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.85■□□□□ 0.45
MMP8P22894 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.85■□□□□ 0.45
MMP8P22894 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP8P22894 AC107918.2-201ENST00000530817 355 ntBASIC17.85■□□□□ 0.45
MMP8P22894 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
MMP8P22894 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP8P22894 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.85■□□□□ 0.45
MMP8P22894 AL773604.1-201ENST00000617417 272 ntBASIC17.85■□□□□ 0.45
MMP8P22894 PGM5P2-202ENST00000637225 1043 ntBASIC17.85■□□□□ 0.45
MMP8P22894 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MMP8P22894 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MMP8P22894 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.84■□□□□ 0.45
MMP8P22894 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.84■□□□□ 0.45
MMP8P22894 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 MIR4492-201ENST00000581627 80 ntBASIC17.84■□□□□ 0.45
MMP8P22894 MPDU1-223ENST00000582151 728 ntBASIC17.84■□□□□ 0.45
MMP8P22894 AL139011.1-202ENST00000642063 584 ntBASIC17.84■□□□□ 0.45
MMP8P22894 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.84■□□□□ 0.45
MMP8P22894 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP8P22894 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.84■□□□□ 0.45
MMP8P22894 UBALD1-205ENST00000590891 2641 ntBASIC17.84■□□□□ 0.45
MMP8P22894 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.83■□□□□ 0.45
MMP8P22894 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP8P22894 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP8P22894 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.83■□□□□ 0.45
MMP8P22894 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
MMP8P22894 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP8P22894 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.83■□□□□ 0.45
MMP8P22894 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
MMP8P22894 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 MRPL3P1-201ENST00000400109 1033 ntBASIC17.83■□□□□ 0.44
MMP8P22894 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
MMP8P22894 AL031284.1-201ENST00000419297 478 ntBASIC17.83■□□□□ 0.44
MMP8P22894 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 HLA-J-202ENST00000469281 1241 ntBASIC17.83■□□□□ 0.44
MMP8P22894 RNA5SP419-201ENST00000515908 135 ntBASIC17.83■□□□□ 0.44
MMP8P22894 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
MMP8P22894 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP8P22894 AL049840.3-201ENST00000602669 611 ntBASIC17.83■□□□□ 0.44
MMP8P22894 MIR7706-201ENST00000613747 67 ntBASIC17.83■□□□□ 0.44
MMP8P22894 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP8P22894 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
MMP8P22894 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
MMP8P22894 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP8P22894 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP8P22894 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP8P22894 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
MMP8P22894 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms