Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC010327.4-202ENST00000591484 748 ntBASIC17.96■□□□□ 0.47
PTPN1P18031 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN1P18031 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN1P18031 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN1P18031 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PTPN1P18031 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTPN1P18031 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.96■□□□□ 0.46
PTPN1P18031 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.96■□□□□ 0.46
PTPN1P18031 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.96■□□□□ 0.46
PTPN1P18031 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN1P18031 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN1P18031 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN1P18031 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 RPSAP43-201ENST00000402237 625 ntBASIC17.95■□□□□ 0.46
PTPN1P18031 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN1P18031 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN1P18031 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN1P18031 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.95■□□□□ 0.46
PTPN1P18031 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN1P18031 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN1P18031 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 AL645728.2-201ENST00000641974 660 ntBASIC17.95■□□□□ 0.46
PTPN1P18031 AP001094.4-201ENST00000579008 2176 ntBASIC17.95■□□□□ 0.46
PTPN1P18031 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN1P18031 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PTPN1P18031 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.95■□□□□ 0.46
PTPN1P18031 TUBB8P12-201ENST00000308911 1335 ntBASIC17.95■□□□□ 0.46
PTPN1P18031 TUBB7P-202ENST00000428444 1305 ntBASIC17.95■□□□□ 0.46
PTPN1P18031 TUBB8P7-204ENST00000567960 1332 ntBASIC17.95■□□□□ 0.46
PTPN1P18031 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN1P18031 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN1P18031 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN1P18031 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PTPN1P18031 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN1P18031 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PTPN1P18031 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 SLC22A20-204ENST00000530038 1673 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PTPN1P18031 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN1P18031 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN1P18031 GPX1P2-201ENST00000429271 606 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN1P18031 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN1P18031 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN1P18031 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 AL031432.2-201ENST00000566714 459 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 AL928711.1-201ENST00000570165 459 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 MIR3687-2-201ENST00000577708 61 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 AC091167.2-201ENST00000579581 588 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 MPDU1-223ENST00000582151 728 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 MIR3687-1-201ENST00000614492 61 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PTPN1P18031 AC060834.1-201ENST00000443027 2032 ntBASIC17.94■□□□□ 0.46
PTPN1P18031 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN1P18031 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN1P18031 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PTPN1P18031 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PTPN1P18031 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN1P18031 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN1P18031 AC012569.1-201ENST00000591191 1524 ntBASIC17.93■□□□□ 0.46
PTPN1P18031 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN1P18031 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN1P18031 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN1P18031 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PTPN1P18031 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms