Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CLEC4GP1-201ENST00000596555 870 ntBASIC17.86■□□□□ 0.45
RARAP10276 AC064862.7-201ENST00000604520 867 ntBASIC17.86■□□□□ 0.45
RARAP10276 AL355877.3-201ENST00000622820 899 ntBASIC17.86■□□□□ 0.45
RARAP10276 AL022326.1-202ENST00000641533 845 ntBASIC17.86■□□□□ 0.45
RARAP10276 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.86■□□□□ 0.45
RARAP10276 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.86■□□□□ 0.45
RARAP10276 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
RARAP10276 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RARAP10276 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.85■□□□□ 0.45
RARAP10276 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.85■□□□□ 0.45
RARAP10276 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RARAP10276 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 AKR1C7P-201ENST00000305623 895 ntBASIC17.85■□□□□ 0.45
RARAP10276 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.85■□□□□ 0.45
RARAP10276 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 FGFR3P6-201ENST00000457012 610 ntBASIC17.85■□□□□ 0.45
RARAP10276 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.85■□□□□ 0.45
RARAP10276 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.85■□□□□ 0.45
RARAP10276 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.85■□□□□ 0.45
RARAP10276 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.85■□□□□ 0.45
RARAP10276 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
RARAP10276 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RARAP10276 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.85■□□□□ 0.45
RARAP10276 REXO1L6P-202ENST00000619970 1078 ntBASIC17.85■□□□□ 0.45
RARAP10276 AL139288.1-201ENST00000623748 933 ntBASIC17.85■□□□□ 0.45
RARAP10276 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.85■□□□□ 0.45
RARAP10276 AL662844.4-201ENST00000606367 2838 ntBASIC17.85■□□□□ 0.45
RARAP10276 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RARAP10276 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RARAP10276 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RARAP10276 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.84■□□□□ 0.45
RARAP10276 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RARAP10276 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.84■□□□□ 0.45
RARAP10276 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.84■□□□□ 0.45
RARAP10276 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RARAP10276 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.84■□□□□ 0.45
RARAP10276 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms