Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 AC142381.1-201ENST00000426099 345 ntBASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 MPDU1-223ENST00000582151 728 ntBASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 AL138828.2-201ENST00000615812 383 ntBASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSB-PGBD3P0DP91 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSB-PGBD3P0DP91 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 RNF165-205ENST00000588679 2904 ntBASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 AC090340.1-201ENST00000620778 4980 ntBASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 COX5BP8-201ENST00000416911 349 ntBASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 AC105233.2-201ENST00000523697 349 ntBASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 AF228730.5-201ENST00000530288 346 ntBASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 SRP9-204ENST00000619790 377 ntTSL 2 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.34■■□□□ 1.17
CSB-PGBD3P0DP91 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 AC133963.1-201ENST00000504166 1679 ntBASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms