Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 AC107918.2-201ENST00000530817 355 ntBASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40ALP0C0E4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 AC140658.5-201ENST00000438532 169 ntBASIC16■□□□□ 0.15
RAB40ALP0C0E4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 AC027612.4-201ENST00000605371 583 ntBASIC16■□□□□ 0.15
RAB40ALP0C0E4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAB40ALP0C0E4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40ALP0C0E4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 CYMP-203ENST00000474680 1263 ntBASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 FAM86C2P-203ENST00000528684 1004 ntBASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 MIR4515-201ENST00000584082 81 ntBASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms