Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CD4P01730 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CD4P01730 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.71■□□□□ 0.59
CD4P01730 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD4P01730 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.71■□□□□ 0.58
CD4P01730 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.7■□□□□ 0.58
CD4P01730 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CD4P01730 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.7■□□□□ 0.58
CD4P01730 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CD4P01730 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CD4P01730 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 WASH6P-202ENST00000359512 1437 ntBASIC18.7■□□□□ 0.58
CD4P01730 MIR346-201ENST00000362234 95 ntBASIC18.7■□□□□ 0.58
CD4P01730 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CD4P01730 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.7■□□□□ 0.58
CD4P01730 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.7■□□□□ 0.58
CD4P01730 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.7■□□□□ 0.58
CD4P01730 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.7■□□□□ 0.58
CD4P01730 MIR6080-201ENST00000617359 66 ntBASIC18.7■□□□□ 0.58
CD4P01730 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CD4P01730 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 LYSMD4-203ENST00000378904 2122 ntBASIC18.7■□□□□ 0.58
CD4P01730 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD4P01730 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
CD4P01730 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.69■□□□□ 0.58
CD4P01730 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CD4P01730 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.69■□□□□ 0.58
CD4P01730 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.69■□□□□ 0.58
CD4P01730 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CD4P01730 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CD4P01730 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.69■□□□□ 0.58
CD4P01730 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.69■□□□□ 0.58
CD4P01730 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 AC004890.2-204ENST00000481968 304 ntBASIC18.69■□□□□ 0.58
CD4P01730 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.69■□□□□ 0.58
CD4P01730 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CD4P01730 AP000842.3-202ENST00000569238 1080 ntBASIC18.69■□□□□ 0.58
CD4P01730 AC008267.7-201ENST00000624570 1194 ntBASIC18.69■□□□□ 0.58
CD4P01730 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.69■□□□□ 0.58
CD4P01730 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 AC134043.2-201ENST00000624206 2238 ntBASIC18.69■□□□□ 0.58
CD4P01730 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.69■□□□□ 0.58
CD4P01730 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD4P01730 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CD4P01730 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.68■□□□□ 0.58
CD4P01730 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CD4P01730 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.68■□□□□ 0.58
CD4P01730 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.68■□□□□ 0.58
CD4P01730 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.68■□□□□ 0.58
CD4P01730 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.68■□□□□ 0.58
CD4P01730 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.68■□□□□ 0.58
CD4P01730 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.68■□□□□ 0.58
CD4P01730 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.68■□□□□ 0.58
CD4P01730 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.68■□□□□ 0.58
CD4P01730 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.68■□□□□ 0.58
CD4P01730 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 NOC2LP2-201ENST00000407594 1944 ntBASIC18.68■□□□□ 0.58
CD4P01730 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.68■□□□□ 0.58
CD4P01730 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.68■□□□□ 0.58
CD4P01730 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD4P01730 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.67■□□□□ 0.58
CD4P01730 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CD4P01730 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD4P01730 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.67■□□□□ 0.58
CD4P01730 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.67■□□□□ 0.58
CD4P01730 MRPS18AP1-201ENST00000414458 589 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms