Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRUB2O95900 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRUB2O95900 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRUB2O95900 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRUB2O95900 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRUB2O95900 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.81■□□□□ 0.44
TRUB2O95900 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRUB2O95900 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
TRUB2O95900 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.8■□□□□ 0.44
TRUB2O95900 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRUB2O95900 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRUB2O95900 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 PCDHB17P-201ENST00000539533 2393 ntBASIC17.8■□□□□ 0.44
TRUB2O95900 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.8■□□□□ 0.44
TRUB2O95900 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 AC034105.1-201ENST00000563488 319 ntBASIC17.8■□□□□ 0.44
TRUB2O95900 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.8■□□□□ 0.44
TRUB2O95900 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRUB2O95900 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRUB2O95900 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRUB2O95900 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRUB2O95900 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TRUB2O95900 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRUB2O95900 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.79■□□□□ 0.44
TRUB2O95900 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.79■□□□□ 0.44
TRUB2O95900 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 AL022342.1-201ENST00000400363 863 ntBASIC17.79■□□□□ 0.44
TRUB2O95900 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.79■□□□□ 0.44
TRUB2O95900 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 AC087163.2-201ENST00000457299 853 ntBASIC17.79■□□□□ 0.44
TRUB2O95900 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRUB2O95900 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.79■□□□□ 0.44
TRUB2O95900 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.79■□□□□ 0.44
TRUB2O95900 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRUB2O95900 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TRUB2O95900 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRUB2O95900 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.79■□□□□ 0.44
TRUB2O95900 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRUB2O95900 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
TRUB2O95900 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRUB2O95900 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.78■□□□□ 0.44
TRUB2O95900 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRUB2O95900 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRUB2O95900 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 MRPL20P1-201ENST00000400819 433 ntBASIC17.78■□□□□ 0.44
TRUB2O95900 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.78■□□□□ 0.44
TRUB2O95900 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms