Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH8O95206 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH8O95206 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH8O95206 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDH8O95206 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH8O95206 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
PCDH8O95206 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH8O95206 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH8O95206 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH8O95206 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.96■□□□□ 0.3
PCDH8O95206 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH8O95206 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH8O95206 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH8O95206 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDH8O95206 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
PCDH8O95206 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH8O95206 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH8O95206 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDH8O95206 PMS2P2-201ENST00000425039 1128 ntBASIC16.95■□□□□ 0.3
PCDH8O95206 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDH8O95206 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.95■□□□□ 0.3
PCDH8O95206 AC005412.3-201ENST00000580309 715 ntBASIC16.95■□□□□ 0.3
PCDH8O95206 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH8O95206 MIR4515-201ENST00000584082 81 ntBASIC16.95■□□□□ 0.3
PCDH8O95206 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH8O95206 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH8O95206 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDH8O95206 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH8O95206 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH8O95206 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH8O95206 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH8O95206 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDH8O95206 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH8O95206 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH8O95206 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH8O95206 AC005332.8-201ENST00000622750 2735 ntBASIC16.94■□□□□ 0.3
PCDH8O95206 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
PCDH8O95206 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDH8O95206 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH8O95206 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH8O95206 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
PCDH8O95206 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 AC002056.1-201ENST00000395613 760 ntBASIC16.94■□□□□ 0.3
PCDH8O95206 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
PCDH8O95206 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH8O95206 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH8O95206 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH8O95206 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH8O95206 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH8O95206 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDH8O95206 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDH8O95206 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH8O95206 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
PCDH8O95206 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 AC116353.5-201ENST00000638148 1699 ntBASIC16.94■□□□□ 0.3
PCDH8O95206 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 KRT18P28-201ENST00000453838 1332 ntBASIC16.94■□□□□ 0.3
PCDH8O95206 CROCCP2-202ENST00000412962 2773 ntBASIC16.94■□□□□ 0.3
PCDH8O95206 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH8O95206 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PCDH8O95206 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms