Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
BEST1O76090 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST1O76090 AL031432.2-201ENST00000566714 459 ntBASIC17.78■□□□□ 0.44
BEST1O76090 AL928711.1-201ENST00000570165 459 ntBASIC17.78■□□□□ 0.44
BEST1O76090 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 AC068137.2-201ENST00000605408 478 ntBASIC17.78■□□□□ 0.44
BEST1O76090 AC139530.3-201ENST00000620344 690 ntBASIC17.78■□□□□ 0.44
BEST1O76090 AL645728.2-201ENST00000641974 660 ntBASIC17.78■□□□□ 0.44
BEST1O76090 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST1O76090 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST1O76090 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
BEST1O76090 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.77■□□□□ 0.44
BEST1O76090 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.77■□□□□ 0.44
BEST1O76090 AC091167.2-201ENST00000579581 588 ntBASIC17.77■□□□□ 0.44
BEST1O76090 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 AC091812.2-201ENST00000619081 385 ntBASIC17.77■□□□□ 0.44
BEST1O76090 C20orf181-201ENST00000623918 480 ntBASIC17.77■□□□□ 0.44
BEST1O76090 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST1O76090 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
BEST1O76090 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BEST1O76090 AC105020.1-201ENST00000435356 2205 ntBASIC17.76■□□□□ 0.43
BEST1O76090 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
BEST1O76090 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 TUBB8P12-201ENST00000308911 1335 ntBASIC17.76■□□□□ 0.43
BEST1O76090 TUBB7P-202ENST00000428444 1305 ntBASIC17.76■□□□□ 0.43
BEST1O76090 TUBB8P7-204ENST00000567960 1332 ntBASIC17.76■□□□□ 0.43
BEST1O76090 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
BEST1O76090 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
BEST1O76090 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
BEST1O76090 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST1O76090 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST1O76090 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
BEST1O76090 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.76■□□□□ 0.43
BEST1O76090 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.76■□□□□ 0.43
BEST1O76090 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST1O76090 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BEST1O76090 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.76■□□□□ 0.43
BEST1O76090 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST1O76090 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.76■□□□□ 0.43
BEST1O76090 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST1O76090 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
BEST1O76090 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BEST1O76090 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST1O76090 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BEST1O76090 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
BEST1O76090 BCL2-203ENST00000589955 5011 ntBASIC17.75■□□□□ 0.43
BEST1O76090 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BEST1O76090 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 AL671710.1-201ENST00000610245 2349 ntBASIC17.75■□□□□ 0.43
BEST1O76090 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST1O76090 MIR1233-2-201ENST00000408138 82 ntBASIC17.75■□□□□ 0.43
BEST1O76090 MIR1233-1-201ENST00000408722 82 ntBASIC17.75■□□□□ 0.43
BEST1O76090 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.75■□□□□ 0.43
BEST1O76090 HTR5BP-201ENST00000430851 1154 ntBASIC17.75■□□□□ 0.43
BEST1O76090 FAM58CP-201ENST00000435741 640 ntBASIC17.75■□□□□ 0.43
BEST1O76090 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST1O76090 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
BEST1O76090 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.75■□□□□ 0.43
BEST1O76090 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
BEST1O76090 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 AC005829.1-201ENST00000570002 483 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms