Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 LINC00895-201ENST00000629028 1637 ntBASIC16.34■□□□□ 0.21
PRAMEF4O60810 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 MRPL3P1-201ENST00000400109 1033 ntBASIC16.34■□□□□ 0.21
PRAMEF4O60810 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF4O60810 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF4O60810 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
PRAMEF4O60810 SNX33P1-201ENST00000592116 1762 ntBASIC16.33■□□□□ 0.21
PRAMEF4O60810 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.33■□□□□ 0.21
PRAMEF4O60810 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF4O60810 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF4O60810 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PRAMEF4O60810 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PRAMEF4O60810 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.33■□□□□ 0.21
PRAMEF4O60810 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PRAMEF4O60810 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 AC136632.2-201ENST00000512891 861 ntBASIC16.33■□□□□ 0.2
PRAMEF4O60810 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 AF228730.7-201ENST00000641842 219 ntBASIC16.33■□□□□ 0.2
PRAMEF4O60810 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 AL021920.2-201ENST00000624828 1351 ntBASIC16.33■□□□□ 0.2
PRAMEF4O60810 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF4O60810 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PRAMEF4O60810 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 AC004870.1-201ENST00000315132 882 ntBASIC16.32■□□□□ 0.2
PRAMEF4O60810 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms