Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.96■□□□□ 0.15
HCN1O60741 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.96■□□□□ 0.15
HCN1O60741 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.96■□□□□ 0.15
HCN1O60741 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HCN1O60741 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HCN1O60741 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.96■□□□□ 0.14
HCN1O60741 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HCN1O60741 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HCN1O60741 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HCN1O60741 PMPCAP1-201ENST00000508114 1576 ntBASIC15.96■□□□□ 0.14
HCN1O60741 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HCN1O60741 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
HCN1O60741 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.95■□□□□ 0.14
HCN1O60741 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
HCN1O60741 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HCN1O60741 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HCN1O60741 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.95■□□□□ 0.14
HCN1O60741 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.95■□□□□ 0.14
HCN1O60741 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.95■□□□□ 0.14
HCN1O60741 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.95■□□□□ 0.14
HCN1O60741 NKAPP1-205ENST00000585790 367 ntBASIC15.95■□□□□ 0.14
HCN1O60741 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.95■□□□□ 0.14
HCN1O60741 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
HCN1O60741 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HCN1O60741 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.95■□□□□ 0.14
HCN1O60741 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.95■□□□□ 0.14
HCN1O60741 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.95■□□□□ 0.14
HCN1O60741 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.95■□□□□ 0.14
HCN1O60741 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCN1O60741 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.94■□□□□ 0.14
HCN1O60741 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
HCN1O60741 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 AC079776.2-201ENST00000641154 1609 ntBASIC15.94■□□□□ 0.14
HCN1O60741 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
HCN1O60741 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.94■□□□□ 0.14
HCN1O60741 HNRNPDP1-201ENST00000439535 754 ntBASIC15.94■□□□□ 0.14
HCN1O60741 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 OR7E14P-202ENST00000530490 1290 ntBASIC15.94■□□□□ 0.14
HCN1O60741 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.94■□□□□ 0.14
HCN1O60741 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.94■□□□□ 0.14
HCN1O60741 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.94■□□□□ 0.14
HCN1O60741 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
HCN1O60741 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.94■□□□□ 0.14
HCN1O60741 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 AC073592.4-201ENST00000623827 446 ntBASIC15.94■□□□□ 0.14
HCN1O60741 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HCN1O60741 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCN1O60741 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HCN1O60741 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms