Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 RNF216P1-203ENST00000404404 2427 ntBASIC16.25■□□□□ 0.19
LCMT2O60294 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
LCMT2O60294 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.24■□□□□ 0.19
LCMT2O60294 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.24■□□□□ 0.19
LCMT2O60294 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.24■□□□□ 0.19
LCMT2O60294 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.24■□□□□ 0.19
LCMT2O60294 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.24■□□□□ 0.19
LCMT2O60294 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LCMT2O60294 PRSS29P-201ENST00000440800 595 ntBASIC16.24■□□□□ 0.19
LCMT2O60294 VN2R19P-201ENST00000442399 1052 ntBASIC16.24■□□□□ 0.19
LCMT2O60294 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.24■□□□□ 0.19
LCMT2O60294 AC107918.2-201ENST00000530817 355 ntBASIC16.24■□□□□ 0.19
LCMT2O60294 MIR4751-201ENST00000578027 74 ntBASIC16.24■□□□□ 0.19
LCMT2O60294 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.24■□□□□ 0.19
LCMT2O60294 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 KRT8P49-201ENST00000604166 1432 ntBASIC16.24■□□□□ 0.19
LCMT2O60294 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
LCMT2O60294 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LCMT2O60294 AL021920.2-201ENST00000624828 1351 ntBASIC16.24■□□□□ 0.19
LCMT2O60294 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LCMT2O60294 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LCMT2O60294 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 AL645728.1-201ENST00000366221 2101 ntBASIC16.23■□□□□ 0.19
LCMT2O60294 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 CRYGEP-201ENST00000412192 528 ntBASIC16.23■□□□□ 0.19
LCMT2O60294 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.23■□□□□ 0.19
LCMT2O60294 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.23■□□□□ 0.19
LCMT2O60294 AC106730.1-201ENST00000566722 1090 ntBASIC16.23■□□□□ 0.19
LCMT2O60294 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.23■□□□□ 0.19
LCMT2O60294 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LCMT2O60294 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LCMT2O60294 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms