Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TPM4P1-201ENST00000436100 807 ntBASIC15.16■□□□□ 0.02
TRAF3IP2O43734 AC087163.2-201ENST00000457299 853 ntBASIC15.16■□□□□ 0.02
TRAF3IP2O43734 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 PI4KAP1-204ENST00000612579 1703 ntBASIC15.16■□□□□ 0.02
TRAF3IP2O43734 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 RPS2P28-201ENST00000314255 741 ntBASIC15.15■□□□□ 0.02
TRAF3IP2O43734 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 MRPL3P1-201ENST00000400109 1033 ntBASIC15.15■□□□□ 0.02
TRAF3IP2O43734 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 AL049840.3-201ENST00000602669 611 ntBASIC15.15■□□□□ 0.02
TRAF3IP2O43734 AL356488.2-201ENST00000602755 427 ntBASIC15.15■□□□□ 0.02
TRAF3IP2O43734 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 MIR1199-201ENST00000621445 119 ntBASIC15.15■□□□□ 0.02
TRAF3IP2O43734 PKD1P5-201ENST00000532415 10291 ntBASIC15.15■□□□□ 0.02
TRAF3IP2O43734 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP2O43734 AC078925.2-201ENST00000624013 1973 ntBASIC15.15■□□□□ 0.02
TRAF3IP2O43734 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 AGGF1P2-201ENST00000426656 2106 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 AL021920.2-201ENST00000624828 1351 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 RNF216P1-203ENST00000404404 2427 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 AL031284.1-201ENST00000419297 478 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 RNA5SP419-201ENST00000515908 135 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 SLC25A6P4-201ENST00000586535 553 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 AC008667.4-201ENST00000607370 168 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 KRT8P49-201ENST00000604166 1432 ntBASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms