Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB2O43679 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB2O43679 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LDB2O43679 AL031284.1-201ENST00000419297 478 ntBASIC16.99■□□□□ 0.31
LDB2O43679 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.99■□□□□ 0.31
LDB2O43679 AC009078.2-202ENST00000463353 338 ntBASIC16.99■□□□□ 0.31
LDB2O43679 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LDB2O43679 AP002490.2-201ENST00000524791 560 ntBASIC16.99■□□□□ 0.31
LDB2O43679 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB2O43679 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.99■□□□□ 0.31
LDB2O43679 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB2O43679 SLC25A6P4-201ENST00000586535 553 ntBASIC16.99■□□□□ 0.31
LDB2O43679 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB2O43679 MIR1199-201ENST00000621445 119 ntBASIC16.99■□□□□ 0.31
LDB2O43679 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB2O43679 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB2O43679 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB2O43679 AL391256.1-201ENST00000443260 1855 ntBASIC16.99■□□□□ 0.31
LDB2O43679 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB2O43679 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 AC092171.3-201ENST00000610122 2651 ntBASIC16.98■□□□□ 0.31
LDB2O43679 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 AL603756.1-201ENST00000606511 2163 ntBASIC16.98■□□□□ 0.31
LDB2O43679 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.98■□□□□ 0.31
LDB2O43679 GGTLC5P-201ENST00000617623 998 ntBASIC16.98■□□□□ 0.31
LDB2O43679 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.98■□□□□ 0.31
LDB2O43679 PGM5P2-202ENST00000637225 1043 ntBASIC16.98■□□□□ 0.31
LDB2O43679 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.98■□□□□ 0.31
LDB2O43679 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
LDB2O43679 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB2O43679 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.97■□□□□ 0.31
LDB2O43679 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.97■□□□□ 0.31
LDB2O43679 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LDB2O43679 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.97■□□□□ 0.31
LDB2O43679 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.97■□□□□ 0.31
LDB2O43679 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.97■□□□□ 0.31
LDB2O43679 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.97■□□□□ 0.31
LDB2O43679 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.97■□□□□ 0.31
LDB2O43679 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LDB2O43679 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.97■□□□□ 0.31
LDB2O43679 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.97■□□□□ 0.31
LDB2O43679 AC117500.6-201ENST00000624871 588 ntBASIC16.97■□□□□ 0.31
LDB2O43679 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LDB2O43679 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms