Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2AO43633 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHMP2AO43633 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
CHMP2AO43633 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CHMP2AO43633 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP2AO43633 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHMP2AO43633 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.1■□□□□ 0.65
CHMP2AO43633 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHMP2AO43633 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHMP2AO43633 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP2AO43633 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.1■□□□□ 0.65
CHMP2AO43633 AL513480.1-201ENST00000451731 511 ntBASIC19.1■□□□□ 0.65
CHMP2AO43633 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CHMP2AO43633 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHMP2AO43633 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.1■□□□□ 0.65
CHMP2AO43633 AC002347.1-201ENST00000569543 541 ntBASIC19.1■□□□□ 0.65
CHMP2AO43633 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.1■□□□□ 0.65
CHMP2AO43633 REXO1L3P-201ENST00000622202 1288 ntBASIC19.1■□□□□ 0.65
CHMP2AO43633 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP2AO43633 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP2AO43633 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP2AO43633 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP2AO43633 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 AC025580.3-201ENST00000617932 1424 ntBASIC19.09■□□□□ 0.65
CHMP2AO43633 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHMP2AO43633 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP2AO43633 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 AC129492.6-201ENST00000611383 1305 ntBASIC19.09■□□□□ 0.65
CHMP2AO43633 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 KRT18P13-201ENST00000400056 1290 ntBASIC19.09■□□□□ 0.65
CHMP2AO43633 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP2AO43633 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP2AO43633 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CHMP2AO43633 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP2AO43633 KRT19P2-202ENST00000557173 1012 ntBASIC19.09■□□□□ 0.65
CHMP2AO43633 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP2AO43633 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP2AO43633 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 AC010327.4-202ENST00000591484 748 ntBASIC19.09■□□□□ 0.65
CHMP2AO43633 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CHMP2AO43633 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP2AO43633 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP2AO43633 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP2AO43633 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP2AO43633 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CHMP2AO43633 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP2AO43633 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP2AO43633 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP2AO43633 AP001094.4-201ENST00000579008 2176 ntBASIC19.08■□□□□ 0.65
CHMP2AO43633 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP2AO43633 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2AO43633 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP2AO43633 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CHMP2AO43633 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2AO43633 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP2AO43633 YBX2P1-201ENST00000394192 760 ntBASIC19.08■□□□□ 0.64
CHMP2AO43633 RHOQP3-201ENST00000437982 621 ntBASIC19.08■□□□□ 0.64
CHMP2AO43633 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP2AO43633 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP2AO43633 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2AO43633 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP2AO43633 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP2AO43633 DUX4L17-201ENST00000557360 1267 ntBASIC19.08■□□□□ 0.64
CHMP2AO43633 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP2AO43633 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CHMP2AO43633 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP2AO43633 AC023141.13-201ENST00000604991 943 ntBASIC19.08■□□□□ 0.64
CHMP2AO43633 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2AO43633 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP2AO43633 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms