Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.96■□□□□ 0.31
PHGDHO43175 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PHGDHO43175 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.96■□□□□ 0.31
PHGDHO43175 AC097637.2-201ENST00000624096 1997 ntBASIC16.96■□□□□ 0.31
PHGDHO43175 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PHGDHO43175 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHGDHO43175 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.96■□□□□ 0.3
PHGDHO43175 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
PHGDHO43175 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHGDHO43175 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHGDHO43175 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHGDHO43175 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PHGDHO43175 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PHGDHO43175 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PHGDHO43175 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
PHGDHO43175 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.95■□□□□ 0.3
PHGDHO43175 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PHGDHO43175 POM121L3P-201ENST00000419331 1163 ntBASIC16.95■□□□□ 0.3
PHGDHO43175 ACTG1P4-201ENST00000425123 1122 ntBASIC16.95■□□□□ 0.3
PHGDHO43175 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.95■□□□□ 0.3
PHGDHO43175 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.95■□□□□ 0.3
PHGDHO43175 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.95■□□□□ 0.3
PHGDHO43175 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PHGDHO43175 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.95■□□□□ 0.3
PHGDHO43175 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PHGDHO43175 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PHGDHO43175 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PHGDHO43175 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PHGDHO43175 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PHGDHO43175 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHGDHO43175 AC008741.2-201ENST00000612792 3115 ntBASIC16.94■□□□□ 0.3
PHGDHO43175 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.94■□□□□ 0.3
PHGDHO43175 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
PHGDHO43175 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.94■□□□□ 0.3
PHGDHO43175 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
PHGDHO43175 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
PHGDHO43175 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.94■□□□□ 0.3
PHGDHO43175 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PHGDHO43175 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.94■□□□□ 0.3
PHGDHO43175 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
PHGDHO43175 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.94■□□□□ 0.3
PHGDHO43175 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.94■□□□□ 0.3
PHGDHO43175 AC012615.1-201ENST00000565797 1299 ntBASIC16.94■□□□□ 0.3
PHGDHO43175 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.94■□□□□ 0.3
PHGDHO43175 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.94■□□□□ 0.3
PHGDHO43175 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.94■□□□□ 0.3
PHGDHO43175 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.94■□□□□ 0.3
PHGDHO43175 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHGDHO43175 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.93■□□□□ 0.3
PHGDHO43175 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 HLA-A-202ENST00000376806 1854 ntBASIC16.93■□□□□ 0.3
PHGDHO43175 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms