Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.58■□□□□ 0.4
TRANK1O15050 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRANK1O15050 MIR4492-201ENST00000581627 80 ntBASIC17.58■□□□□ 0.4
TRANK1O15050 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRANK1O15050 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.58■□□□□ 0.4
TRANK1O15050 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRANK1O15050 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
TRANK1O15050 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRANK1O15050 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.58■□□□□ 0.4
TRANK1O15050 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.58■□□□□ 0.4
TRANK1O15050 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.58■□□□□ 0.4
TRANK1O15050 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRANK1O15050 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
TRANK1O15050 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.58■□□□□ 0.4
TRANK1O15050 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.58■□□□□ 0.4
TRANK1O15050 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.58■□□□□ 0.4
TRANK1O15050 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRANK1O15050 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.57■□□□□ 0.4
TRANK1O15050 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.57■□□□□ 0.4
TRANK1O15050 SRD5A3P1-201ENST00000603021 949 ntBASIC17.57■□□□□ 0.4
TRANK1O15050 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.57■□□□□ 0.4
TRANK1O15050 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.57■□□□□ 0.4
TRANK1O15050 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.57■□□□□ 0.4
TRANK1O15050 PDIA3P1-201ENST00000471856 1510 ntBASIC17.57■□□□□ 0.4
TRANK1O15050 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 AC009113.1-201ENST00000570267 2443 ntBASIC17.57■□□□□ 0.4
TRANK1O15050 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.57■□□□□ 0.4
TRANK1O15050 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRANK1O15050 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 AC044860.1-202ENST00000559481 777 ntBASIC17.57■□□□□ 0.4
TRANK1O15050 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRANK1O15050 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.57■□□□□ 0.4
TRANK1O15050 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRANK1O15050 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
TRANK1O15050 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRANK1O15050 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 AC015936.2-201ENST00000593177 259 ntBASIC17.56■□□□□ 0.4
TRANK1O15050 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.56■□□□□ 0.4
TRANK1O15050 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRANK1O15050 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRANK1O15050 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 CSF2RBP1-201ENST00000447905 391 ntBASIC17.56■□□□□ 0.4
TRANK1O15050 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.56■□□□□ 0.4
TRANK1O15050 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.56■□□□□ 0.4
TRANK1O15050 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.56■□□□□ 0.4
TRANK1O15050 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRANK1O15050 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.56■□□□□ 0.4
TRANK1O15050 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRANK1O15050 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.55■□□□□ 0.4
TRANK1O15050 KRT8P12-202ENST00000472924 1397 ntBASIC17.55■□□□□ 0.4
TRANK1O15050 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRANK1O15050 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.55■□□□□ 0.4
TRANK1O15050 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRANK1O15050 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.55■□□□□ 0.4
TRANK1O15050 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.55■□□□□ 0.4
TRANK1O15050 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRANK1O15050 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRANK1O15050 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRANK1O15050 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
TRANK1O15050 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.55■□□□□ 0.4
TRANK1O15050 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.55■□□□□ 0.4
TRANK1O15050 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.55■□□□□ 0.4
TRANK1O15050 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRANK1O15050 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.55■□□□□ 0.4
TRANK1O15050 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.55■□□□□ 0.4
TRANK1O15050 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.55■□□□□ 0.4
TRANK1O15050 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRANK1O15050 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRANK1O15050 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.55■□□□□ 0.4
TRANK1O15050 FLJ13224-201ENST00000313737 1514 ntBASIC17.55■□□□□ 0.4
TRANK1O15050 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms