Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPTBN2O15020 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPTBN2O15020 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPTBN2O15020 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.04■□□□□ 0.16
SPTBN2O15020 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPTBN2O15020 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.04■□□□□ 0.16
SPTBN2O15020 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.04■□□□□ 0.16
SPTBN2O15020 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPTBN2O15020 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.04■□□□□ 0.16
SPTBN2O15020 MIR8072-201ENST00000614241 80 ntBASIC16.04■□□□□ 0.16
SPTBN2O15020 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPTBN2O15020 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPTBN2O15020 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.04■□□□□ 0.16
SPTBN2O15020 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SPTBN2O15020 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SPTBN2O15020 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SPTBN2O15020 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.03■□□□□ 0.16
SPTBN2O15020 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.03■□□□□ 0.16
SPTBN2O15020 MIR4706-201ENST00000582134 82 ntBASIC16.03■□□□□ 0.16
SPTBN2O15020 AC016629.1-201ENST00000596579 586 ntBASIC16.03■□□□□ 0.16
SPTBN2O15020 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 CLDN5-201ENST00000403084 2357 ntBASIC16.03■□□□□ 0.16
SPTBN2O15020 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.03■□□□□ 0.16
SPTBN2O15020 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPTBN2O15020 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.03■□□□□ 0.16
SPTBN2O15020 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.03■□□□□ 0.16
SPTBN2O15020 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.02■□□□□ 0.16
SPTBN2O15020 NUS1P3-201ENST00000423502 862 ntBASIC16.02■□□□□ 0.16
SPTBN2O15020 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.02■□□□□ 0.16
SPTBN2O15020 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.02■□□□□ 0.16
SPTBN2O15020 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
SPTBN2O15020 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.02■□□□□ 0.16
SPTBN2O15020 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.02■□□□□ 0.16
SPTBN2O15020 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SPTBN2O15020 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.02■□□□□ 0.16
SPTBN2O15020 AC046185.3-201ENST00000623228 1824 ntBASIC16.02■□□□□ 0.16
SPTBN2O15020 REXO1L11P-201ENST00000620964 1927 ntBASIC16.02■□□□□ 0.16
SPTBN2O15020 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPTBN2O15020 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPTBN2O15020 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.02■□□□□ 0.15
SPTBN2O15020 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.02■□□□□ 0.15
SPTBN2O15020 BOLA2P3-201ENST00000404566 256 ntBASIC16.02■□□□□ 0.15
SPTBN2O15020 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.02■□□□□ 0.15
SPTBN2O15020 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 SPDYE18-201ENST00000510091 1050 ntBASIC16.02■□□□□ 0.15
SPTBN2O15020 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.02■□□□□ 0.15
SPTBN2O15020 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 AC005412.3-201ENST00000580309 715 ntBASIC16.02■□□□□ 0.15
SPTBN2O15020 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.02■□□□□ 0.15
SPTBN2O15020 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SPTBN2O15020 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
SPTBN2O15020 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPTBN2O15020 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
SPTBN2O15020 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPTBN2O15020 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPTBN2O15020 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SPTBN2O15020 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.01■□□□□ 0.15
SPTBN2O15020 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPTBN2O15020 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPTBN2O15020 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPTBN2O15020 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.01■□□□□ 0.15
SPTBN2O15020 FO681548.1-201ENST00000455617 1132 ntBASIC16.01■□□□□ 0.15
SPTBN2O15020 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPTBN2O15020 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.01■□□□□ 0.15
SPTBN2O15020 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SPTBN2O15020 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPTBN2O15020 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SPTBN2O15020 AL020996.1-203ENST00000536896 2307 ntBASIC16.01■□□□□ 0.15
SPTBN2O15020 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.01■□□□□ 0.15
SPTBN2O15020 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPTBN2O15020 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms