Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UPK2O00526 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UPK2O00526 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK2O00526 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 AP002414.1-201ENST00000391405 1147 ntBASIC13.66□□□□□ -0.22
UPK2O00526 NUS1P2-201ENST00000417358 873 ntBASIC13.66□□□□□ -0.22
UPK2O00526 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.66□□□□□ -0.22
UPK2O00526 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK2O00526 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK2O00526 AL591684.3-201ENST00000605187 298 ntBASIC13.66□□□□□ -0.22
UPK2O00526 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UPK2O00526 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK2O00526 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.66□□□□□ -0.22
UPK2O00526 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK2O00526 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK2O00526 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UPK2O00526 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK2O00526 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK2O00526 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
UPK2O00526 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK2O00526 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UPK2O00526 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 DOC2GP-204ENST00000639052 2548 ntBASIC13.65□□□□□ -0.22
UPK2O00526 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
UPK2O00526 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.65□□□□□ -0.22
UPK2O00526 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.65□□□□□ -0.22
UPK2O00526 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.65□□□□□ -0.22
UPK2O00526 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 AC010331.1-201ENST00000611423 582 ntBASIC13.65□□□□□ -0.22
UPK2O00526 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK2O00526 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UPK2O00526 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK2O00526 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.65□□□□□ -0.22
UPK2O00526 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK2O00526 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK2O00526 AC018695.7-201ENST00000624587 2492 ntBASIC13.65□□□□□ -0.22
UPK2O00526 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UPK2O00526 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK2O00526 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UPK2O00526 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK2O00526 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UPK2O00526 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms