Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AC116353.5-201ENST00000638148 1699 ntBASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AL390955.2-201ENST00000603032 514 ntBASIC19.63■□□□□ 0.73
USP17L11C9JVI0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 AC092474.2-201ENST00000424288 719 ntBASIC19.62■□□□□ 0.73
USP17L11C9JVI0 GPS2P2-201ENST00000430745 888 ntBASIC19.62■□□□□ 0.73
USP17L11C9JVI0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 RNA5SP421-201ENST00000516864 134 ntBASIC19.62■□□□□ 0.73
USP17L11C9JVI0 IGHV3-62-201ENST00000520057 340 ntBASIC19.62■□□□□ 0.73
USP17L11C9JVI0 AC109635.5-201ENST00000533593 962 ntBASIC19.62■□□□□ 0.73
USP17L11C9JVI0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 LINC01225-203ENST00000563550 1244 ntBASIC19.62■□□□□ 0.73
USP17L11C9JVI0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 AC106820.2-201ENST00000563775 3264 ntBASIC19.62■□□□□ 0.73
USP17L11C9JVI0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP17L11C9JVI0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 AC139713.2-201ENST00000641328 2723 ntBASIC19.61■□□□□ 0.73
USP17L11C9JVI0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 HCG4-201ENST00000418983 998 ntBASIC19.61■□□□□ 0.73
USP17L11C9JVI0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 RBPMS2P1-201ENST00000437762 623 ntBASIC19.61■□□□□ 0.73
USP17L11C9JVI0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 AC069262.1-201ENST00000539058 672 ntBASIC19.61■□□□□ 0.73
USP17L11C9JVI0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms