Protein–RNA interactions for Protein: A6NJR5

Putative speedy protein-like protein 3, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A6NJR5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
A6NJR5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
A6NJR5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.93■□□□□ 0.62
A6NJR5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
A6NJR5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.92■□□□□ 0.62
A6NJR5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
A6NJR5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 HCG4-201ENST00000418983 998 ntBASIC18.92■□□□□ 0.62
A6NJR5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.92■□□□□ 0.62
A6NJR5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.92■□□□□ 0.62
A6NJR5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.92■□□□□ 0.62
A6NJR5 AC069262.1-201ENST00000539058 672 ntBASIC18.92■□□□□ 0.62
A6NJR5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
A6NJR5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.92■□□□□ 0.62
A6NJR5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
A6NJR5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
A6NJR5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
A6NJR5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
A6NJR5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.91■□□□□ 0.62
A6NJR5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
A6NJR5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 EGFEM1P-202ENST00000431685 1563 ntBASIC18.91■□□□□ 0.62
A6NJR5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.91■□□□□ 0.62
A6NJR5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.91■□□□□ 0.62
A6NJR5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
A6NJR5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
A6NJR5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.91■□□□□ 0.62
A6NJR5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.91■□□□□ 0.62
A6NJR5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.91■□□□□ 0.62
A6NJR5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.91■□□□□ 0.62
A6NJR5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.91■□□□□ 0.62
A6NJR5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.91■□□□□ 0.62
A6NJR5 TOP3BP1-201ENST00000420768 1380 ntBASIC18.91■□□□□ 0.62
A6NJR5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.91■□□□□ 0.62
A6NJR5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.91■□□□□ 0.62
A6NJR5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
A6NJR5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.91■□□□□ 0.62
A6NJR5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
A6NJR5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
A6NJR5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
A6NJR5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
A6NJR5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.9■□□□□ 0.62
A6NJR5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.9■□□□□ 0.62
A6NJR5 SLC22A20-204ENST00000530038 1673 ntBASIC18.9■□□□□ 0.62
A6NJR5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
A6NJR5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.9■□□□□ 0.62
A6NJR5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.9■□□□□ 0.62
A6NJR5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.9■□□□□ 0.62
A6NJR5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.9■□□□□ 0.62
A6NJR5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.9■□□□□ 0.62
A6NJR5 RNA5SP421-201ENST00000516864 134 ntBASIC18.9■□□□□ 0.62
A6NJR5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.9■□□□□ 0.62
A6NJR5 AC091167.2-201ENST00000579581 588 ntBASIC18.9■□□□□ 0.62
A6NJR5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.9■□□□□ 0.62
A6NJR5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A6NJR5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms