Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC132938.5-201ENST00000624980 1813 ntBASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 MTHFR-217ENST00000641820 1569 ntBASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC068418.2-201ENST00000577309 3703 ntBASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC011467.2-201ENST00000598425 242 ntBASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRBV6-7A0A0A0MS04 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 KLF4P1-201ENST00000412782 1185 ntBASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 VENTXP7-201ENST00000475503 772 ntBASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 DUX4L26-201ENST00000489078 1255 ntBASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-7A0A0A0MS04 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms