Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 AL355306.1-201ENST00000415580 579 ntBASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 AC023141.5-201ENST00000458585 616 ntBASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 LINC02084-201ENST00000606069 1096 ntBASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 AC093028.1-201ENST00000622998 982 ntBASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1G3Q9Y6M4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 MIR770-201ENST00000390219 98 ntBASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 MIR3197-201ENST00000582241 73 ntBASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AC106028.4-201ENST00000614509 607 ntBASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 AC133963.1-201ENST00000504166 1679 ntBASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1G3Q9Y6M4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms