Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HS3ST3A1Q9Y663 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HS3ST3A1Q9Y663 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 AC108860.2-201ENST00000562760 2183 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 MIR346-201ENST00000362234 95 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 GPS2P2-201ENST00000430745 888 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 RBPMS2P1-201ENST00000437762 623 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 AC011467.4-201ENST00000594891 528 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 Z92544.3-201ENST00000624747 417 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 CROCCP2-202ENST00000412962 2773 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.57■□□□□ 0.24
HS3ST3A1Q9Y663 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 CNN2P2-201ENST00000443536 909 ntBASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 CNN2P3-201ENST00000450201 906 ntBASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 AC027307.2-201ENST00000591252 911 ntBASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 AC092364.2-202ENST00000597012 1073 ntBASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 AL136317.3-201ENST00000618497 906 ntBASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HS3ST3A1Q9Y663 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 MIR3197-201ENST00000582241 73 ntBASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 LINC02084-201ENST00000606069 1096 ntBASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms