Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 UPK3BP1-201ENST00000428678 509 ntBASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGB1Q9Y5G3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 MYCLP1-201ENST00000372451 1075 ntBASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGB1Q9Y5G3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB1Q9Y5G3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms