Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AC027612.4-201ENST00000605371 583 ntBASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 AC060834.1-201ENST00000443027 2032 ntBASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDZRN3Q9UPQ7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AL049757.1-201ENST00000616842 1596 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AC016396.2-201ENST00000562575 1417 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 IGLL3P-201ENST00000412472 434 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 TSEN15P1-201ENST00000423257 515 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 RHOQP3-201ENST00000437982 621 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AC106028.4-201ENST00000614509 607 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AC004877.2-201ENST00000623941 599 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AC132938.5-201ENST00000624980 1813 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 AC138932.1-201ENST00000534164 6830 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 BCL2-203ENST00000589955 5011 ntBASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDZRN3Q9UPQ7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 AC124067.4-201ENST00000519691 2379 ntBASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 KLF4P1-201ENST00000412782 1185 ntBASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 AL139327.4-201ENST00000612362 153 ntBASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 AC116353.5-201ENST00000638148 1699 ntBASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDZRN3Q9UPQ7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDZRN3Q9UPQ7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDZRN3Q9UPQ7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDZRN3Q9UPQ7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PDZRN3Q9UPQ7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PDZRN3Q9UPQ7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDZRN3Q9UPQ7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDZRN3Q9UPQ7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms