Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 AL513523.2-202ENST00000427283 2040 ntBASIC19.56■□□□□ 0.72
USP25Q9UHP3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 AC116407.4-201ENST00000623319 1061 ntBASIC19.56■□□□□ 0.72
USP25Q9UHP3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 AC124947.2-201ENST00000547118 1133 ntBASIC19.55■□□□□ 0.72
USP25Q9UHP3 AL049597.2-201ENST00000565575 961 ntBASIC19.55■□□□□ 0.72
USP25Q9UHP3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.55■□□□□ 0.72
USP25Q9UHP3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP25Q9UHP3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 AD001527.2-201ENST00000622994 785 ntBASIC19.54■□□□□ 0.72
USP25Q9UHP3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms