Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC52A3Q9NQ40 AC097637.2-201ENST00000624096 1997 ntBASIC16.11■□□□□ 0.17
SLC52A3Q9NQ40 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC52A3Q9NQ40 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC52A3Q9NQ40 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC52A3Q9NQ40 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC52A3Q9NQ40 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AC090340.1-201ENST00000620778 4980 ntBASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AL596257.1-201ENST00000641463 2694 ntBASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AL596087.1-201ENST00000400979 1969 ntBASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 IGHV3-47-201ENST00000425060 335 ntBASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 GGT3P-204ENST00000453783 1664 ntBASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AL603832.2-201ENST00000566195 2125 ntBASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC52A3Q9NQ40 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 LINC00554-201ENST00000564841 3011 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 AL031133.1-201ENST00000406807 723 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 DRAXINP1-201ENST00000437611 948 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 AP002383.4-201ENST00000442518 975 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 VENTXP7-201ENST00000475503 772 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 RN7SL850P-201ENST00000579959 291 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 TERC-201ENST00000602385 541 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 AL121672.3-201ENST00000608644 468 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 AL590326.2-201ENST00000625139 305 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 AL590787.1-201ENST00000568856 1315 ntBASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC52A3Q9NQ40 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC52A3Q9NQ40 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms