Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TUBB7P-202ENST00000428444 1305 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 TUBB8P7-204ENST00000567960 1332 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 AC005332.1-201ENST00000577698 1310 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 DRAXINP1-201ENST00000437611 948 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 FRMD8P1-201ENST00000440433 1524 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 AC006449.5-201ENST00000610658 2098 ntBASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 AC233702.3-201ENST00000578656 1387 ntBASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 AL139384.1-201ENST00000612143 3047 ntBASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 INTS4P1-201ENST00000438455 1935 ntBASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 ACTG1P4-201ENST00000425123 1122 ntBASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
POLR2J3Q9H1A7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
POLR2J3Q9H1A7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 PMPCAP1-201ENST00000508114 1576 ntBASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms