Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 AL020989.1-201ENST00000422979 469 ntBASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 CHCHD2P8-201ENST00000429873 447 ntBASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 DUX4L26-201ENST00000489078 1255 ntBASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 AP005901.3-202ENST00000581653 237 ntBASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHACTR1Q9C0D0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 SPDYE21P-201ENST00000413323 827 ntBASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 AC091607.1-201ENST00000490318 1060 ntBASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 AP000867.4-201ENST00000641616 219 ntBASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 KRT8P49-201ENST00000604166 1432 ntBASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHACTR1Q9C0D0 PCDHA1-201ENST00000378133 2726 ntBASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 AL121672.3-201ENST00000608644 468 ntBASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms